Glycine soja (wild soybean): 114414420
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Entry
114414420 CDS
T06057
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114414420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114414420
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114414420
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
HECT type E3
114414420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
114414420
NCBI-ProteinID:
XP_028234489
LinkDB
All DBs
Position
6:complement(328103..338159)
Genome browser
AA seq
1895 aa
AA seq
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METRSRKRAEASSAAPSSSSSTTTTTASRSAKCSRLSSSSSSIPNTTTANTRSRSARNNN
NNSVSPMDPTNESSGSRRDRRGKNFDRDNSDKGKEKEHDVRIRDAERERALALNLEAEDV
GDDDDDNDSEGGVGILHQNLISASTFRGLLRKLGAGLDDLLPATAMGGSVPSSHQTGGLK
QILSGLRADGEEGRQVEALTHLCDMLSIGTEDSLSTFSVDSFVPVLVGLLNHESNPDVML
LAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTAC
LRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPPDAADFVMEAVPLLTNLLQYHDSK
VLEHASVCLTRIAKAFASSPDKLDELCNHGLVTQAASLISTSGSGGGQASLSTPTYTGLI
RLLSTCASGSPLGAKTLLLHGASGILKDILSGSGVSSNTSVSPALSRPADQIFEIVNLAN
ELLPPLPQGTISLPVSSNLFVKESVVKKSPPSGNPGIQEDTNGNVHEISARAKLLNDKPE
LLKQFGMDLLPVLMQIYGASVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISSFLAG
VLAWKDPHVLVPALQISEILMEKLPGIFSKMFVREGVVHAVDQLILAGNATNISTQTSSA
EKDTDSVSGTSSRSRRYRLRSGNSNPDANRSDDLKSPVPVNVGLPPSSVETPTTNSSIRA
SISSVANAFKDKYFPSDPGSVEVGVSDDLLHLKNLCSKLNTGVDDQRSKAKGKVEAFGFD
LDDDSTNTEEYLIGVISDMLKELGKGDSVSTFEFIGSGVVEALLNYFSCGYFSKDRISET
NLPKLRQQALTRFKSFVAVALPLSIDNGAVAPMTVLVQKLQNVLSSLERFPVMLSNSSRS
SSGSGRLSSGLSALSQPIKLRFCRAQGEKSLKDYSSSVVLIDPLASLAAIEEFLWARVQR
GESGLKSTVGTENSESGTTPAGAGVSSPSSYIPSTAFRYSTGSRSRSSVNIGDTPRKEIF
QDNGTSSSKSKGKAVLKPAQEEARGPQTRNAVRRRAALDKDAQMKPANGDSTSEDEELDI
SPVEIDEALVIEDDDISDDEDEDREDVRRDYYLPVYLPDEVHDVKLGDSAEESTVAPATS
DSQTNAASGSSSKAGTARGCDSADFRSGYSSSSRGAMSFAAAAMAGLGYANSRGFRGGRD
RHGRLLFGSSNDPPKLIFTAGGKQLNRNLTIYQAIQRQLMLDEDDDERLAGSDRVSSDGS
SLWGDIYTITYQRAENQPDKASNGGSSSNTSKSAKSGSALNSSSEAKLHQTSVLDSILQG
DLPCDLEKSNPTYNILALLRVLEGLNQLAPHLRTQMVSDSFAKGKILDLDELGVTTGARV
LPEEFVSGKLTPKLARQIQDALALCSGSLPLWCCQLTKACPFLFPFDTRRQYFYSTAFGL
SRALYRLQQQQGADGHGSTTEREVRVGRLQRQKVRVSRNRVLDSAAKVMGMYSSQKAVLE
VEYFGEVGTGLGPTLEFYTILSHDLQQVGLQMWRSYSSDKHQMEIDRDEKKKKSDGSGPN
LAGDGELVEAPLGLFPRPWPTNSDASEGSRFSKVVEYFRLLGRVMAKALQDGRLLDLPLS
VAFYKLVLGQDLDLHDILSIDAELGKTLQEFNALVCRKHYIESIGGSYTDTIVNLHFHGV
PIEDLCLDFTLPGYPEYTLKPGDEIVDINNLEEYISLVADATVKTGIMRQIEAFRAGFNQ
VFDISSLQIFTPQELDNLLCGCRELWESETLADHIKFDHGYNAKSPAIINLLEIMGGFTP
EQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTAVNTSSNGNGPSESADDDLPSVM
TCANYLKLPPYSTKEIMYKKLLYAINEGRGSFDLS
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgtagtcgtaagcgggcggaggcttcctcagctgccccttcatcatcctcg
tccaccaccaccaccaccgcctctcgttccgccaagtgctctcgtctttcttcttcttct
tcttccatcccaaacacaactactgctaatacacgttctcgttccgccaggaacaacaac
aacaactccgtttctcccatggaccccaccaatgaatcctccggttccagacgtgatcgc
cgcggcaagaatttcgatagggacaattcggacaaagggaaggagaaagaacatgatgtt
aggattagggatgcggagcgggagcgagccttggcgttgaacttggaggctgaagatgtt
ggggatgacgacgatgataatgatagtgagggcggtgtcggaattctgcaccagaatttg
atttctgccagtacctttcgagggcttcttcggaaacttggtgctggtttggatgatttg
cttcctgctacggctatgggcggttctgtgccctcttctcaccagactggcggactcaag
cagatattgtctggtttgcgtgccgatggggaagaaggtcgtcaggttgaggcattgacg
catctttgtgacatgctctccattggcactgaagattcattaagtacattttcggttgat
tcatttgttcctgtgctagtgggcttgcttaatcatgagagcaatcccgatgtcatgctt
cttgcggccagggcgctaacccatttatgtgatgtgcttccttcatcctgtgctgctgtt
gtgcattatggtgcagtctctatcttctgtgcgaggctgcttaccatagagtatatggac
ttggctgagcagtctcttcaagcactaaagaagatttctcaggagcacccaactgcctgt
cttcgagctggagctctgatggctgttctttcttacttggacttcttctcgacaggagtt
cagcgggtggcattgtctactgctgcaaatatgtgcaagaagcttcctcctgatgcagct
gactttgtgatggaagctgttccacttttgacaaacctccttcagtaccacgactccaag
gtcctggaacatgcctctgtttgtttgacacgaatagctaaagcgtttgcatcatctcca
gacaaattagatgaattgtgcaatcatggactggtaacacaagctgcctctctcatttct
accagcggttctggaggtgggcaggcttctctcagcaccccaacatatactggtttgatc
cgccttctttccacatgtgcaagtgggtctcctcttggagctaaaacgttgcttctccat
ggagctagtggcatacttaaagatatactatccggttccggtgtttcttctaacacctct
gtttcgcctgcattgagtaggccagcggatcagatatttgagattgtgaacctggcaaat
gaacttctgcctccattgcctcaaggaaccatttctcttcctgtcagctccaacttgttt
gtgaaagagtctgttgtgaaaaaatctcctccttctgggaatcccgggatacaagaagac
acaaatggaaatgttcatgaaatatcagctcgtgcaaaattattaaatgataagcctgag
ttacttaagcaatttgggatggatctcctcccagttttaatgcagatatatggtgctagc
gtcaatggtccagttcggcacaaatgtctttctgtcattggaaaattgatgtatttcagc
acagctgagatgatccagtctttgttgagtgtaacaaatatatcaagtttcttagctggt
gtgttagcatggaaagatccacatgttttggttcctgccttgcaaatttcagaaattctt
atggaaaagcttcctggaattttctctaaaatgtttgtcagagaaggtgtggttcatgca
gttgaccaacttattttggctggaaatgcaactaatatatctacacaaacatcatctgct
gagaaggatactgattctgtatctggaacttcatctcgctctagacgctatcgcctgcgc
agtggtaattcaaatcccgatgcgaaccgttcggatgatttgaagagtccagttccagta
aatgttggtttgccaccaagttctgtggaaactccaacaactaattctagtatccgtgca
tccattagctcagttgctaatgcttttaaagacaagtactttccttctgatcctgggtct
gttgaagtgggtgttagtgatgatcttttgcatctgaaaaatctatgctcgaagttgaac
actggtgttgatgaccaaagaagtaaggccaagggaaaagttgaagcttttggatttgat
ctggatgatgattctactaacacagaagagtatttgattggggtgatatctgacatgcta
aaggaacttggcaaaggagatagtgtatctacttttgaatttatcggtagtggtgttgtt
gaagccttgctaaattatttttcttgtgggtatttctctaaagatcgaatatcagaaacc
aatctccccaagcttcgccaacaggcacttacaaggttcaagtcatttgttgctgttgca
ttacctttgagcattgacaatggggctgttgctcctatgactgtcttggttcagaagctt
caaaatgtgttgtcctccttggagcgtttccctgtaatgctgagtaattcatctcggtca
tctagtggaagtggacgtctctcctctgggctaagtgcattatctcagcccataaaatta
cgtttctgtcgagcccagggtgaaaagtcacttaaggattattcatccagtgtggtactg
attgatccgttagcaagtctagcagccatcgaggaatttctatgggctcgtgtccagcgt
ggtgaatctggtctaaagtctactgtaggcactgaaaattctgaatctggaacaactcct
gcaggggctggtgtttcatctccttcctcttatattccctccactgcctttcgttattca
accggatccagatccagatcatctgttaatataggagatacacctagaaaagaaatattt
caagacaatggcacgagctcatctaagagcaagggtaaagctgtattaaaacctgcgcag
gaggaagcacggggaccccaaacaaggaatgcagtgcgcagaagagcagctctagataaa
gacgctcaaatgaaacctgcaaatggcgactcaacttctgaggatgaagaattggatata
tctcctgttgaaattgatgaggctttggtgattgaagatgatgatatttctgatgatgag
gatgaagaccgtgaagatgtacggagggattattatcttcctgtctacttgcctgacgaa
gtgcatgatgtgaaattgggtgactcagctgaggagagtactgttgctcctgcaacaagt
gatagccagactaatgcagcttcaggttctagcagcaaagcgggtacagccaggggttgt
gactctgctgattttaggagtgggtattcatctagctcaaggggtgcaatgtcatttgct
gctgctgctatggctggacttggatatgctaatagcagaggtttcaggggtggcagagat
aggcatgggcgcctgttgtttggtagttctaatgatcctccaaagttgatttttactgct
ggtgggaagcagcttaataggaatttgactatatatcaggcaattcaaagacagctcatg
ctagatgaagatgatgatgagagacttgctggcagtgaccgtgtatctagtgatggaagc
agtctgtggggtgatatttacaccatcacttatcaaagggcagaaaaccagccagataag
gcatccaatggtggatcaagttcaaatacttcaaaatctgccaaatctgggtctgcatta
aattccagctcagaagctaaattgcatcagacatctgttctagacagtatattgcaggga
gacttgccatgtgatctagagaaatctaatcctacctacaatattttggcactcctgcgt
gtgctggagggtttgaaccagcttgcgcctcatttgaggacccaaatggtttctgatagc
ttcgccaagggaaaaatcttggatttagatgagctaggtgttacaactggtgctagggtg
cttccagaggaatttgtgagtggtaagcttactccaaaattggctaggcaaatacaagat
gcccttgcactatgcagtggtagtcttcccttatggtgttgccagttgactaaagcatgc
cctttcttgtttccttttgacacccgacgacagtacttttattctaccgcatttgggtta
tctcgtgcattgtatcgacttcagcagcagcaaggcgctgatggtcatggatcaacaact
gagagggaggtgagagttgggagattgcagcgccaaaaggttcgtgtctctcgaaatcgt
gtcttggattctgctgcaaaagttatggggatgtattctagccaaaaagctgtacttgaa
gtagaatattttggtgaagttgggactggcctgggtcccacccttgagttttatacaatt
ctaagtcatgatttgcaacaagttggattgcaaatgtggagatcttattcttcagacaaa
catcaaatggaaattgatagagatgaaaagaaaaagaaaagtgatggctctgggcctaat
ttggctggagatggagaacttgttgaagctcctctggggttgtttcctcggccttggcct
acaaattctgatgcatcagagggtagccggttttcaaaagtcgttgagtatttccggctg
ctaggtcgtgttatggctaaagctcttcaagacggacgacttttggacctgccattgtca
gtggcattttataagcttgttctcggccaagatcttgatttgcatgacattctgtccatt
gatgctgagcttgggaagactttgcaagagttcaatgcccttgtttgtcggaaacattat
atagaatctattggtggtagctatacagatacaattgttaacttgcattttcatggggtg
ccaatcgaagatctttgcttagattttacactccctggttatcctgaatacaccttgaag
ccaggagatgaaattgttgatatcaacaatttggaggagtatatatccttggtggcagat
gcaactgtcaagactggaatcatgcggcaaatagaagcatttagagcagggtttaaccag
gtttttgacatctcgtctttacaaatttttactcctcaagaactagataatttgctttgc
ggctgcagggagttgtgggagtctgagacacttgctgatcatataaaattcgaccatggg
tacaatgcaaagagccctgccattattaatttacttgaaattatgggagggttcacacca
gagcagcaacgtgccttctgtcaatttgttactggtgcacctaggctgccacctggaggg
ctggcagttctaaatccaaaactaacgattgtgaggaagctttcgtcaaccgcagttaat
acttcatctaatgggaatggaccttcagaatcagcagatgatgacttgcctagtgtgatg
acatgtgctaattacctgaaacttcctccttactctaccaaggaaattatgtacaagaag
ctactctatgcaatcaacgagggccggggatcctttgatttatcatga
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integrated database retrieval system
