Glycine soja (wild soybean): 114414615
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Entry
114414615 CDS
T06057
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114414615
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114414615
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114414615
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114414615
03041 Spliceosome [BR:
gsj03041
]
114414615
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
114414615
Protein phosphatases and associated proteins [BR:
gsj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
114414615
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114414615
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114414615
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114414615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
114414615
NCBI-ProteinID:
XP_028234733
LinkDB
All DBs
Position
6:2112950..2114478
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AA seq
302 aa
AA seq
DB search
MEGLDGLIERLLEVRKNRGKQIQLVESEIRSLCSTAKDLFLRQPNLLELEAPINVCGDIH
GQYPDLLRVLEYGGFPPDSNYLFLGDYVDRGKQSVETICLLLAYKIKYPENFFLLRGNHE
CASINRIYGFYDECKRRFSVRLWKIFTDCFNCLPVAAVIDDKILCMHGGLSPDMESLNQI
KAIERPVDVPDQGLLCDLLWADPDNEISGWGENDRGVSYTFGPDKVSEFLKKHDLDLICR
AHQVVEDGYQFFADRQLVTIFSAPNYCGEFNNAGALMCVDQTLLCSFQIVKPFGTFRGKL
TS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaaggattggatggtttgatagagaggcttttggaagtaaggaagaacagaggcaaa
caaattcaactggtagagtcagaaattcgcagcctttgcagcacggcaaaagatctcttc
ctcaggcagccaaacctgttggaattggaagctcccattaacgtttgtggtgatatacac
gggcaatatccagacctgttgcgagtgttggagtacggtgggtttccgccggattcgaat
tacctattccttggagactacgtggacagaggaaaacagagcgtggaaacaatatgcctg
ctgctcgcctacaagataaaatacccagaaaactttttccttctccgaggaaaccacgag
tgtgcctctattaacagaatctacgggttttacgacgagtgcaagcgcagattcagcgtc
cgtctctggaagatattcacagattgcttcaactgtttgcccgtggccgcagtgatcgat
gacaaaatcctctgcatgcacggcgggctttccccggacatggagagcctgaatcagatc
aaagccatagagaggcccgtggacgtgcccgaccagggcctcttatgcgacctcctctgg
gccgatcccgacaacgaaatcagtggctggggcgagaatgataggggcgtctcctacact
ttcggccccgataaggtctccgagttcttgaagaaacacgatctcgatctcatttgcagg
gcccaccaggtcgtcgaagatggctaccaattcttcgctgacaggcagctcgttaccatc
ttctctgccccaaactattgcggagagttcaacaatgccggtgccctcatgtgcgtcgac
caaactttactctgttcctttcagattgtcaaaccctttggcacctttagaggaaaactc
acttcttaa
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