Glycine soja (wild soybean): 114415049
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Entry
114415049 CDS
T06057
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gsj01001
]
114415049
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114415049
Enzymes [BR:
gsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
114415049
Protein kinases [BR:
gsj01001
]
Serine/threonine kinases: Other
Other
114415049
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114415049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
LisH
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
114415049
NCBI-ProteinID:
XP_028235354
LinkDB
All DBs
Position
6:complement(5849776..5858420)
Genome browser
AA seq
1923 aa
AA seq
DB search
MSLMMEDQANQAPPPQDEEEDSKKEEEELIAKVNKLMEKITSAPDNPNATVLHALASILE
AQESRYMEENGHSSSSTARAAHIIGRLGGLIRENDEFFELISSKFLLETRYSTSIQAASG
RLLLCCSLTWIYPHVFEESVMENIKNWVMDDNTGLPAEEQNLRHNPGRSEAASDSEMLKT
YSTGLLAVCLDGQGQIVEDVLTSGLSAKLMRYLRISVLGETSGNQKDVTHITESRHASTN
TSARGRDDGRGRFRQLLESNHLDDTKMIDERSLDDVTLERVDGEPPDGLGEGTDVHKVDS
DGEDTWRCRDIRDGRIKYGEHDDNIRDDSSRRRANRGWGRSRGKGRVNEGAVESDPILSS
PGSGSRLGQGRSVRDRSILRNADVRRGADSKKTLGRIPSEASAFEREDDDDCFEECRIGS
KDITDLVRKAVRSAEAEARSANAPEEAVKAAGDAAADLVKTAASEEYKSSNDEEAAFLAA
SRATSTVIDAASAVEVSRSSICDNTVTENVSGKETETNEDVEEYFIPDTKSLAQLREKYC
IQCLELLGEYVEVLGPVLHEKGVDVCLGLLQKNSKHWEASKVALLLPDVMKLICALAAHR
KFAALFVDRGGMQKLLDVPRMPQTFFGLSSCLFTIGSLQGIMERVCALPSKVVNEVVELA
LQLLDCNQDQARKNAALFFAAAFVFRAVLDAFDSLDGLQKLLGLLNDAASVRSGVNSGAL
NLSNSGSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFRAHLLVLVDSIRPNKSNRSAARN
IPSVRAVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWLAVEKFLASNGHITMLELCQ
APPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLSNNRVGIAVILDAANIASNHVDP
EIIQPALNVLVNLVCPPPSISNKPAMVAQGQQLASSQTSNGPPSEARDRNAERNVSDRAV
HSTSQIDPRERNGESNAVDRGSASGLSTQPVNSLPQTPVASAASGLVGDRRISLGAGAGC
AGLAAQLEQGYRQAREVVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDD
TIAHILTKLQVGKKLSELIRDSGSQTLGTEQGRWQAELSQAAIELIGIVTNSGRASTLAA
TDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLAQTASMLLKEAQLTPLPS
LVPPSSLAQQPITQEASSTQIQWPSGRALSGFLTHKLRFNAKDDDAGLKSDSVSAKKKSL
TFSSSFHSRFQHLDSQSSVKKLSDTGKESSETTVVETTFGSSVKHNIDTGSQFKTPITLP
AKRKLSDLKDISMFSSSGKRLNVGDQGFRSPICSSVIRKSCLQSDAVGLFSPTCNLKQSR
CMGDLVDENHSISNLVQMTPSSQVLNDLQPNNAERVTLDSLVVQYLKHQHRQCPAPITTL
PPLSLLHPHVCPEPKRSLDAPSNVTARLGTREFKYMYGGVHGNRRDRQFVYSRFRPWRTC
RDDAGALLTCITFVGDSSHIAVGSHNGELKFFDSNNSNVVESYTGHQSPLTLVQSFVSGE
TQLLLSSSSQDVRLWDATSILGGPSHSFEGCKAARFSNSGNVFAALSSESARREILLYDI
QTCHIESKLSDTFAASTGRGHVYSLIHFNPSDSMLLWNGVLWDRRVSGPVHRFDQFTDYG
GGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSA
VHTRRVKHPLFAAFRTVDAINYSDIATIPVDRCVLDFAAEPTDSFVGLITMDDQDEMYAS
ARIYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDPDVDPLLGPGLGGDSCSDADDMSNDD
DDDSVSDLDEDGDFILDDVDFDGGPGILEIVTEGDEDDDDDSQLLESLSSSDDEDFVGNG
FGY
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgatgatggaggatcaagcgaatcaagcgccaccgccgcaggatgaagaggag
gattctaagaaggaggaagaggaattgattgcgaaggtcaacaaactcatggagaagatt
acttctgcacctgataaccctaacgccaccgtcctccacgcccttgcctctattcttgaa
gcgcaagagtcacgatacatggaagagaatggtcattcttcctccagcactgcacgtgct
gcgcatatcattggtcgccttggcggtttaatccgggaaaatgatgagttctttgagttg
atatcttcaaagtttctgttagaaacaagatactcgacttccattcaagctgcttctggc
agacttctcctgtgctgttccctcacttggatttatcctcatgtttttgaagaatctgtc
atggaaaacataaaaaattgggtgatggatgataacaccgggttgcctgctgaagagcag
aatttgaggcataatccaggtagaagtgaggcggcctcagattctgaaatgttgaaaacc
tattctactggactccttgctgtgtgtttggacggtcaaggtcaaatagtggaagacgta
ttgacatctggcttgtcagctaagctaatgcgttatcttcgtataagcgtgctgggagag
acaagtggcaaccagaaagatgttactcatataacagagagtaggcatgcatctacgaat
acttcagcaagaggtagagacgatggtcgtggtagatttcgccagctcctcgaatcaaat
catttagatgatactaagatgattgatgagagatctttagatgacgtaactcttgaaagg
gtagatggtgaaccacccgatgggcttggtgaaggtactgatgtccacaaggtagattct
gatggggaggatacatggcgctgtagagatatacgtgatggaaggataaaatatggtgag
catgacgataatattagagatgactcttcaaggcggcgtgcaaaccgtggatggggaaga
tctagagggaaaggtagggtcaatgaaggggctgtagaaagtgatcctattttgtcgtct
cctggatctggaagtagattaggacaggggcggagtgttagagacagaagcatattgagg
aatgctgacgttaggaggggggctgattctaagaagacccttggcaggatcccttccgag
gcttctgcttttgaaagagaggatgatgatgattgtttcgaagagtgccgaattggtagt
aaagatattaccgatctggtccggaaggcagtccgatctgctgaagctgaagctagatca
gccaatgcacctgaagaagctgtcaaagcagctggtgatgctgccgctgaccttgttaaa
actgcagcttctgaggaatataaatccagcaatgatgaagaagcagcttttttggctgct
tcgagagctacatcaactgttattgatgctgcatctgcagttgaagtttcaaggagttct
atctgcgacaatactgtgacagagaatgtgagtggcaaagaaacggaaactaatgaggat
gttgaagagtacttcatcccagatactaaatcacttgcacagttgagggaaaaatattgc
attcagtgtcttgagttacttggagaatatgtagaagttcttggccctgtgttgcatgag
aagggggttgatgtgtgtcttggacttctgcagaagaattctaaacattgggaggcatcc
aaagttgctttgctgttgcctgatgtcatgaagctaatctgtgctttggctgcacatagg
aaatttgctgcactatttgtggaccgtgggggaatgcaaaagctgcttgatgtccctaga
atgccacaaactttctttggtctttcttcttgtctatttactattggttctcttcaggga
atcatggaacgagtttgtgctcttccatcaaaagttgttaatgaagttgttgagttagct
ctccaactccttgactgcaatcaagaccaagcccgtaagaatgcagcattgttttttgct
gctgcatttgtcttcagagcagttcttgatgcctttgattccctggatggattacaaaaa
ttacttggccttctaaatgatgctgcttcagtaagatcaggagtaaattctggagccttg
aatttatctaactcaggatcacttcgaaatgatcgatcatctgctgaagtgctgacgtca
tctgagaagcagatagcctatcacacttgtgttgctttgcggcaatatttcagggcacat
ctccttgtcttagtggattccattcgtccaaacaaaagcaaccgtagtgctgctagaaat
attccaagtgtaagggctgtgtacaagccgcttgatattagtaatgaggcaatggatgca
gtattcctacaattacaaaaggatcggaagttaggtcctgcatttgtgagaacacgttgg
ctagcagttgagaagttcttggcatctaatggacatattactatgttggaattgtgtcag
gccccacctgttgagcgatatctgcatgatttgcttcagtatgcattgggtgttcttcac
attgttacattggtacctagcagtcgtaagatgattgtaaatgtaacattaagcaataat
cgtgttggtatcgcggtaattttggatgctgcaaatatagctagtaatcatgtggaccct
gagataattcaaccggcattaaatgttttagtcaatcttgtttgccctcctccttcaatc
agcaataaaccagctatggttgcacaaggtcagcaattggcatcttcccaaacatctaat
ggtcctccctcagaggctagagatagaaatgctgaacgtaatgtctcagatagagctgtt
cactctaccagccagattgatcctagggagaggaatggggagtccaatgctgtagatcga
ggcagtgcttcaggattaagtacacagcctgttaatagtcttccacaaactcctgttgct
tctgcagcttcaggattggttggcgaccgaagaatatctttgggtgcaggagcaggttgt
gctggccttgctgcacaattggaacaaggatatcgtcaggcaagagaggttgtccgctct
aataatggtataaaggttcttctgcatctcctccaaccgcgcatatactcacctcctgct
gctctggactgtcttcgtgctctagcatgtcgagtcctgcttggattagccagagatgat
actatcgcacacatattgacaaagcttcaggttgggaaaaagctatcggaactgattcgg
gattcaggcagccaaacacttggaacagagcagggtaggtggcaagctgaactttcccag
gctgcaattgagctaattgggattgttactaattcagggcgtgcaagtacattagctgct
actgatgcagctactccaactttaaggcgcatagaaagagcagctatagctgctgcgact
cctattacttaccattcaagggaactcctgctcctaatccacgaacacctacaggcatct
ggattggcacaaactgcttctatgttgcttaaagaggctcagttgactcctttgccatca
ttggttcctccctcttctcttgcacaacaacccatcacacaggaagcttcttcaacacaa
attcagtggccctctggtcgtgctctttcaggatttctcactcacaaattaaggtttaat
gcaaaggatgatgatgccggcttgaaaagtgattctgtctctgcaaagaaaaaatcactg
actttctcatcatcttttcattcaagatttcaacaccttgactctcagtcatcagtgaag
aaattgtcagatactggtaaagagtcatccgaaactactgtggtagagactacatttgga
tcttcagtgaaacataacattgatactggatctcagtttaagactccaattaccttgcca
gcgaaacgtaaattatctgatttgaaggatatatcaatgttttcatcgtctggaaaacga
ttaaacgttggagatcaaggatttcgttctcctatttgttcaagtgtaattcgtaaaagc
tgcctgcagagtgatgctgttgggcttttctcaccaacctgtaacctgaaacagagccgt
tgtatgggtgacttggtggatgagaaccatagtatttcaaatctagttcagatgacacca
tcttctcaagtattaaatgaccttcagcccaacaatgctgagcgtgtaacattagattct
ttggtggttcaatatttgaagcatcagcatcgccaatgcccagctcctattaccactctt
cctccactgtctcttctgcatccacatgtctgtcctgaaccaaagcgaagcctagatgcc
ccttctaatgtgacagctcggcttggtacacgtgaatttaaatatatgtatgggggagtg
catgggaatcgcagggatcgtcaatttgtttacagtcggtttaggccgtggcgtacttgt
cgggatgatgctggtgccttgttaacatgcattacatttgttggggactcttctcatatt
gctgttggaagccataatggggagctcaaattttttgactccaacaacagcaatgtggtg
gagagctacacaggtcaccagtctcctttgactcttgttcagtcttttgtttctggtgag
acccagctattactttcttcaagctcccaagatgttaggttgtgggatgcaacatcgatt
ttaggtggtcctagccattcatttgaaggatgcaaggctgccaggtttagcaattctggg
aatgtttttgcagccttgtcatcagaatctgcacgacgggaaattttgttatatgatatc
caaacatgtcatatagagtcaaagttgtcagatacatttgcagcttctacagggcgaggt
catgtttattcgttaatccattttaacccttctgactcaatgctgctttggaatggtgtc
ttgtgggaccggcgggtttctgggcctgttcatcggtttgatcagtttacagactatggt
ggtggaggttttcatcctgctggcaacgaggttattataaactctgaagtctgggatttg
cgcaagttcagactgctacgcagtgtaccttcattagatcaaacatcaataacattcaat
gcacgtggtgatgtaatgtatgcaattctgaggagaaatcttgaggatgtaatgtcagca
gtccacactcgtcgtgtcaagcatcctctttttgcagctttccgcacagtggatgcgata
aattattctgacattgcaactatccctgtggatcgctgtgttcttgattttgcagctgag
ccaacagattcatttgttgggctgattactatggatgatcaagatgagatgtatgcttct
gccagaatctatgaaattggtcgtcggaggccaactgatgatgattctgatcctgatgat
gctgaaagtgaggaggaagacgaggatgatgatgacgacgatcctgatgttgatcctctg
ttaggccctggtcttggtggggatagttgcagtgatgctgatgacatgagcaatgatgac
gatgatgatagtgtgagtgatctggatgaagatggagatttcattttggatgacgtagat
tttgatggaggacctggcattttggaaattgtgacagaaggtgatgaggatgatgatgat
gatagtcagctacttgaatccctaagtagtagtgacgatgaggattttgtgggtaatggc
tttggttattaa
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integrated database retrieval system
