Glycine soja (wild soybean): 114415434
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Entry
114415434 CDS
T06057
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114415434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114415434
03036 Chromosome and associated proteins [BR:
gsj03036
]
114415434
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114415434
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114415434
PBAF complex
114415434
GBAF(ncBAF) complex
114415434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
DUF3306
Motif
Other DBs
NCBI-GeneID:
114415434
NCBI-ProteinID:
XP_028235908
LinkDB
All DBs
Position
6:9472073..9478383
Genome browser
AA seq
785 aa
AA seq
DB search
MPASPSENRTRWRKRKRDSQISRRHQKHEEEEEDDEENPNAAEEDHAERDYDSEDQTHHN
HPNSQPHVEAEVLSDHGVQISQFPAVIKRSVNRPHSSVTAIVALERALESGDNKAQSALD
APILENVSHGQLQALSSVPSDNFALDCDSSFVITPPPILEGRGVVKRFGTKVLVVPMHSD
WFSPATVHRLERQVVPHFFSGKSPDHTPEKYMECRNCIVALHMEDPGMRITVSDCQGLLA
GVNVEDLTRIVRFLDHWGIINYCVRIPSHESPNAVSCLRDEPSGEVRVPSEALKSIDSLI
KFDKPNCKLKADEIYSSLTAHSADVLDLEDRIREHLSENHCNYCSCPLPVVYYQSQKEVD
ILLCTDCFHDGRFVIGHSSIDFVRVDSTRDYGELDGDNWTDQETLLLLEAMEIYNENWNE
IAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSLSLSSNAINRDDSGRLHCYSNGVTAG
PVYQTRDSDHRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSEDNSGSTSQLE
APGHDNRTNSESIHCRDGGPHQETAVSNHNEDKAKVHGSWGIYEGRTTPLSAEKVKDAAK
AGLSAAAMKAKLFSDHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQLERT
KQRIAADRSRMMSARLGTVGATPTMNASGVGTSMASNGNNRQQIISASSSQPSISGYGNN
QPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSASSTAMFNAPSNVQPTTNHPLLRPVSGT
NSGLG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccttcagagaaccgaaccagatggaggaagcgaaagagagattcgcaa
atcagccggcgccaccagaagcacgaggaggaggaggaggacgacgaagaaaaccccaat
gcggcggaggaagaccacgccgaacgcgactacgattcggaggatcagacgcaccacaac
caccctaattcgcaaccgcacgtggaggctgaggttctctctgaccacggcgttcagatt
tcgcagttccccgcggtgattaagcgctccgtgaaccgccctcactcctccgtcaccgca
attgttgctctggagcgagccctcgagtccggagacaacaaggcacaaagcgccctcgat
gctccgattctcgagaacgtgtctcacggccagcttcaagcgctatcgtctgttccctct
gataacttcgctctcgactgtgattcctctttcgtcatcactccccctcccattttggaa
ggtcgtggcgttgttaagcgctttggaactaaggttcttgtagttccaatgcattcagat
tggttttcgcctgccacggtgcacaggttggagaggcaagtggtgccacatttcttttca
gggaaatcgccggatcatactccggagaagtacatggaatgtaggaactgcattgttgct
ttgcacatggaggaccctgggatgaggattacggtttctgattgtcagggtttgttggct
ggggttaatgttgaagatttgactcggattgttaggttccttgatcattggggaattatt
aattactgtgttcggataccaagtcatgagtctcccaatgctgtgtcttgcctgagggat
gagccgagtggagaggtccgtgtgccgtcggaggctttgaaatccatagacagtttgatc
aaatttgacaagcccaactgtaagctgaaagcagacgaaatttattcgtcattgactgca
catagtgccgatgtcttagatctggaggatagaataagagagcatctatcggagaatcat
tgcaattattgttcttgtcctcttcctgttgtatactatcagtctcaaaaggaggttgat
attttactctgcactgattgctttcatgacgggagatttgtcattggtcattcaagtata
gattttgtaagggtggattcgacaagggattatggtgaactagatggggataattggact
gatcaagaaactttgctgcttcttgaagcaatggagatttacaatgagaattggaatgaa
atagctgagcatgttggtaccaagtcaaaagcacaatgcattcttcattttctccgtcta
cccatggaagatggaaaattagaaaatattaacgttccaagtttgtctttgtcatccaat
gcaataaatagagatgatagtggaagactgcattgctactcaaatggagttactgcagga
cctgtctatcaaaccagagattctgaccaccggcttccttttgcaaattctggaaatcct
gttatggctttggttgcctttttagcctctgcggttggaccaagagtagctgcttcttgt
gcccatgcagcgttagcagtattgtcagaggataattctggcagcacgtcacagttggaa
gcaccaggacatgataataggacaaattcagaaagcatacattgtcgagatggtggccct
catcaagaaacagcagtttcaaatcataatgaggataaggcaaaggtacatggttcatgg
ggtatatatgagggtaggacaaccccactctctgctgagaaagttaaagatgcggctaaa
gctggcctttctgctgcagccatgaaagcaaaattattttccgatcacgaagaacgagaa
attcagaggttatgtgctaatatagttaatcatcagctgaaaagattggaattgaagctg
aaacagtttgcagaaattgaaacattgttgatgaaagaatgtgaacaactggagagaaca
aaacaaaggatagctgctgatcggtcccgcatgatgtcagcacgtcttggaactgtggga
gccacacccacaatgaatgcatcgggtgttggtacttcaatggctagtaatggcaacaat
aggcaacaaataatctctgcttcttcctcacaacccagcatttcaggctatggcaacaac
caaccagttcatccacatatgtcctttgccccacgaccttcaatgtttgggttggggcaa
agattgcccctatctatgatacaacaatcacaatcagcttcttcaactgccatgttcaat
gcccctagtaatgtgcagcccactaccaatcatccattgttgaggcctgtatcgggaact
aactctggtttaggttaa
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