Glycine soja (wild soybean): 114415439
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Entry
114415439 CDS
T06057
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03030
DNA replication
gsj03410
Base excision repair
gsj03420
Nucleotide excision repair
gsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114415439
03410 Base excision repair
114415439
03420 Nucleotide excision repair
114415439
03430 Mismatch repair
114415439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsj03032
]
114415439
03036 Chromosome and associated proteins [BR:
gsj03036
]
114415439
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114415439
DNA replication proteins [BR:
gsj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114415439
DNA Replication Termination Factors
ELG1-RFC complex
114415439
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114415439
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114415439
Check point factors
HRAD17(Rad24)-RFC complex
114415439
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
Rad17
AAA_16
RuvB_N
SLFN-g3_helicase
AAA_lid_RFC1
Mg_chelatase
AAA_11
AAA_5
nSTAND_NTPase5
AAA_14
ADK
AAA_24
ResIII
nSTAND3
AAA_assoc_2
AAA_2
AAA_28
Effector_1
PhoH
AAA_25
AAA_7
NPHP3_N
AAA_19
AAA_30
ATPase_2
AAA_18
RNA_helicase
NB-ARC
TIP49
bpMoxR
Parvo_NS1
DUF815
Motif
Other DBs
NCBI-GeneID:
114415439
NCBI-ProteinID:
XP_028235913
LinkDB
All DBs
Position
6:complement(9500010..9505875)
Genome browser
AA seq
342 aa
AA seq
DB search
MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIV
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMS
SRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISSENLISVSGVV
PAKVVEALLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARIS
KKLGEADKCLVDGADEYLQLLDAVSNTIKAFHSLPEAFAYEC
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaatcctgcagagctctcagccatgggtcgagaaataccggccaaagcaagtg
aaagatgttgcccaccaagatgaagttgttcgagtactaacaaacacccttgaaactgga
agttgcccccacatgctcttctatggtcctcctggcacgggaaaaacaactactgccctt
gctatcgcccatcagcttttcggtcctgagctatataagtctagggtgctggagttgaat
gcaagtgacgatagagggattaatgttgttcgaacaaagataaaagattttgctgctgtt
gctgttggtactaatcagtgtaaaaatggttatccttgtccaccatttaagattattgtt
ctagacgaggcagattcaatgactgaagatgctcagaatgccctgaggcgtacaatggaa
acttactctaaagttacaaggttcttttttatatgcaactatgttagcaggattatagaa
ccacttgcttcaaggtgtgcaaaattcaggttcaaaccattatcagaagaaatcatgagc
agccggatattatacatctcccaagaagagggactctgtcttgatgctgaggctctttca
accctgagttttatttctcatggagatcttcgccgggcaatcacatacttgcagtctgca
gctcgcttatttggatcttcaatttcttcagagaatctgatttctgtgtctggggttgtt
ccggcaaaggttgtggaggcacttcttaaagcttgcaaaagtggtaattttgatttggca
aacaaggaagtcaacaatttcattgcagagggatatccagcttctcagatgcttactcag
ttatttgaggccattgttgaagaaaatgacttatctgatgaacagaaagcaagaatatca
aagaagctgggtgaagctgataagtgcttagttgacggtgctgatgaatacttgcaactt
cttgatgcggtcagcaatacgattaaagcttttcacagcttgccagaagcatttgcttac
gaatgttag
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