Glycine soja (wild soybean): 114415520
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Entry
114415520 CDS
T06057
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114415520
Transcription machinery [BR:
gsj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
114415520
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
114415520
NCBI-ProteinID:
XP_028236045
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Position
6:10330226..10333796
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AA seq
507 aa
AA seq
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MGVVTVSSSAARTPLGLNTKFCNNRLKRPLIVAFKGDKHNDSALVATQEKIPVPVETAKK
TQKKRIGKTNKLPKRESSPSSMDVDYNEAAAMLENLYKLSPASDNAECIDGKIKRVSRRG
KKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTRKKRNVGNKI
EKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELT
REPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQD
LCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQ
KAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVD
DDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISRE
MVRKHEVKALMKLKHSARLDYLRRYVV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctcggctgctcggactccattgggattgaatacaaag
ttttgcaataatcgtctgaagagacctttaattgtagcatttaagggggataagcacaat
gactcagctttggttgcaacacaagagaaaattcctgtgccggttgaaacggcgaagaag
acgcagaaaaagaggataggaaaaactaacaaactacctaagagagagagttctccatct
tccatggatgtggactacaatgaagctgctgccatgcttgaaaatctatacaaacttagc
cctgcttctgataatgcagaatgcatagatggtaaaatcaaaagagtctctcggagaggg
aagaaggttgttgatgaaagtgaagaaaaggagttaaagggcgattgggtggtcagaaac
cagaacaagaacaagaaacctaaacgattgaatcttgatcagagaatttcattaaagaat
aacaaaagtggggacgaagtcattccaactcgaaagaaaagaaatgttgggaacaaaatt
gagaagattgaagaacttattcgggaatattcagtatcaactgattttgtcagtatggat
tggaaaagaatgagaatacctcccgttctttcttcttcagagcatgcttggttgttcaaa
ttgatgcaacctatgaaggcactgcttcaagtgaaagaagatttacagcaggagttgaca
agagaacctgcagatggtgaactagctgatgcaacaaacatgagcattacacaagtaagg
aaagcaatagatgttggtcaagctgcaagaaataaactcataaagcacaatctccggctt
gttttgttcgtgatcaacaaatattttacagattttgcaagtggccctaggtttcaagat
ctttgccaggcaggagttaaggggcttataacagcaatcgatcgttttgagccaaacagg
agatttcggctatcaacttatagtttgttttggataagacatgctatcattcgttcaatg
accctctcaaacttcacacgtgttccctttggacttgaatcggttcgagcagaaattcaa
aaagctaaaactgagttaacatttgagcttcagaggtcaccaacagaggaagaaataata
gaaagagttcatatatcccctgaaagataccatgacgtaattaaggcatcaaaatccatt
ctttctctgaactcgagacatacaaccacacaagaggagttcattaatgggatcgttgat
gatgatggtgttaatggtgataataggaaacaacctgctctactaaggcttgctcttgat
gatgtgcttgattccctgaagccgaaggagagcttggtgatcagacagagatttggactt
gatggcaagggtgacagaacattgggagaaattgctgggaacttgaatatatctagggaa
atggttagaaagcacgaagtcaaggctcttatgaagctcaagcattcagctagattggat
tatcttcgccgttatgttgtataa
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