Glycine soja (wild soybean): 114415740
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Entry
114415740 CDS
T06057
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114415740
Spliceosome [BR:
gsj03041
]
Common components
Common spliceosomal components
General mRNP proteins
114415740
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Ortholog
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GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114415740
NCBI-ProteinID:
XP_028236375
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All DBs
Position
6:12223637..12230938
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AA seq
549 aa
AA seq
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MDFDEYDYLEKTVEEQEDHDSSRKKKESERSYRKREEIDEGIEETKSKRSRGDEENGSKK
DKDREERDRERRRDRDRDGERSSRDRDRDRDREKEREKGRERREKDKEREKREKEKEKEK
ERERERREREREREERERSRRSRSRSERERERERDFDTRDSRRFRDKKEAAEPEADPERD
QRTVFAYQMPLKASERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI
ALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVVGPYGAVDRKLYVGNLHFNMTESQL
REIFEPFGPVEIVQLPLDLETGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSV
TDHVGNQDTTAKSADFDDDEGGLSLNAQSRALLMQKLDRSGIAASIGLPIANGSSPAQQA
IMPIGNPGIVPAVAPAVPTQIMPIPVTEPVGNPSECLLLKNMFDPNTETEPDFDLDIKED
VEEECSKYGRVKHIYVDKRSAGFVYLQFETVEAASAAQRAMHTRWFAGRMISAIYMLPQM
YETKFKGDA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgattacttggagaaaacagtggaggagcaagaggaccacgac
agcagccggaagaagaaggagagcgagaggagctacaggaagcgcgaggagatcgacgag
ggaatcgaagagacgaagagcaagaggtccaggggcgacgaagagaacggctccaagaag
gataaggaccgcgaagaacgcgacagggagcgccgcagggacagggatagagatggtgag
agaagtagcagagacagggatagggatagggatagggagaaggagagagagaaagggagg
gaacggagggaaaaggataaagagagggagaagagggagaaggagaaagagaaggagaag
gagagggaaagagaaagaagggagagggaacgggaacgggaagagagagagaggtctcgg
aggagtaggagtcgttccgagagagaaagagaaagagaacgggatttcgacaccagagat
agcaggagatttagggacaaaaaagaggcagcggagcccgaggcagatccagaaagggat
cagagaactgtttttgcttaccagatgcccttaaaggcatcggagagggatgcttatgaa
ttcttctcaaaagctggcaaggtgagggatgtccgtctgatcatggataggaactcaaga
cgatctaaaggagttgggtatattgagttttatgatgcaatgtcagtgccaatggcaatt
gctctctctggccaacttcttctaggacaacctgtaatggtcaagccttctgaggctgaa
aagaaccttgtccaatctaatgctaccagtggagctgctggagtagtaggaccatatgga
gctgtggacaggaaactatatgtggggaaccttcactttaacatgacggagagtcaattg
agagagatttttgagccatttggtccggtagagattgtacaactacctcttgacttggag
acgggacattgcaagggctttgggtttgttcaatttgcccatcttgagcatgccaaggct
gcgcagagtttaaatggaaaattggaaattgctggcaggactataaaggtttcatctgta
acagatcatgttggaaaccaagatacaactgccaaatctgcagattttgatgatgatgaa
ggtggattgtctttaaatgcccaatcaagagcattgcttatgcagaagctggaccgctct
ggcattgctgcaagcattggtctgcccattgcgaatgggtcatctcctgctcaacaggct
attatgcctattggtaatccaggtatagtaccagcagttgcaccagctgtcccaacacaa
attatgcctatcccagtgactgaacctgttggaaaccccagtgagtgtttactgttgaag
aacatgtttgatccaaacactgagaccgaaccagattttgatctagacattaaagaggat
gtagaagaagagtgttccaaatatggacgagtgaagcatatttatgttgacaaaagaagt
gcaggttttgtgtatttgcagtttgaaacagtggaagcagcaagtgctgctcaacgtgca
atgcacacaaggtggtttgcaggcagaatgatatctgctatctatatgctacctcagatg
tatgaaaccaaatttaaaggtgacgcttga
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