Glycine soja (wild soybean): 114416429
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Entry
114416429 CDS
T06057
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114416429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114416429
03009 Ribosome biogenesis [BR:
gsj03009
]
114416429
04131 Membrane trafficking [BR:
gsj04131
]
114416429
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114416429
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
114416429
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
114416429
Membrane trafficking [BR:
gsj04131
]
SNARE
SNARE associated proteins
Others
114416429
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114416429
Exosome [BR:
gsj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114416429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
CDC48_2
AAA_22
AAA_33
AAA_14
NPHP3_N
TIP49
RNA_helicase
ATPase_2
AAA_28
AAA_17
nSTAND3
Mg_chelatase
DUF815
Viral_helicase1
ABC_tran
AAA_7
AAA_18
AAA_lid_PRS2_C
Parvo_NS1
TsaE
NACHT
Vps4_C
IstB_IS21
AAA_19
NB-ARC
AAA_24
Zeta_toxin
KAP_NTPase
bpMoxR
Zot
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
114416429
NCBI-ProteinID:
XP_028237089
LinkDB
All DBs
Position
6:complement(15349982..15354880)
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AA seq
814 aa
AA seq
DB search
MADPTSSNPDKDQSSSDSKCEKKDYSTSILERKKSPNRLVVDEAINDDNSVVTLHPETME
KLHFFRGDTVLIKGKKRRDTICVVLADEQCDEPKIRMNKVVRANLRVRLGDVVSVHQCPD
VKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIE
TDPGEYCVVAPDAEIFCEGEPIKREDEERLNEIGYDDVGGVRKQMAQIRELVELPLRHPQ
LFKSIGVKPPKGILLYGPPGSGKTLIVRAVANETGAFFFSINGPEIMSKLAGESESNLRK
AFEEAEKNSPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRSHVVVIGATN
RPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDNVDLEKVGRDTHGYVG
SDLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALSSSNPSALRETV
VEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA
KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGS
SAGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP
DESSRLQIFKACLRKSPISKDVDLAALARFTHGFSGADITEICQRACKYAIREDIEKDIE
KERRKRENPEAMEEDDTDEVPEIKPAHFEESMKFARRSVSDADIRKYQLFAQTLQQSRGF
GSEFRFPDRNENTAADASDPFSSVTAEGDDDLYS
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaacctcatctaaccctgataaggatcaatcctcttcggactcgaaatgt
gaaaagaaggattattccacatcaatattagaacgcaagaagtctcctaaccgacttgtt
gttgatgaagcaattaatgatgataattccgtggttactttgcaccctgaaacaatggag
aagcttcattttttccggggggacactgttctgataaagggaaagaagcgaagggacaca
atttgtgttgttcttgctgatgaacaatgtgatgaaccaaaaataaggatgaacaaggtt
gttcgggctaatcttagagtgcgacttggcgatgttgtctctgtccatcaatgtccagat
gtgaagtacgggaaacgagttcacatccttccaatcgatgacaccattgagggtgtaact
ggcaacttgtttgatgcatatttgaagccatactttatggagtcataccggccagtgagg
aaaggggacttgttccttgttcggggtgggatgcgcagtgttgaattcaaggtaatagag
actgatcctggtgaatactgtgttgtggcacctgatgctgaaatcttctgtgagggagag
ccaatcaagcgggaagatgaagagagactaaatgaaattggctatgatgatgtcggtggt
gttaggaaacaaatggctcaaattcgtgagctggtagaacttccacttagacatccgcag
ctcttcaaatcaattggagttaagcccccaaaaggaatcttgctttatggaccacctggt
tcaggaaagactctgattgtaagagcagttgctaatgagactggtgcattctttttttcg
attaatggaccagaaatcatgtcgaagctggccggtgagagtgaaagcaatctgaggaag
gcatttgaagaagctgaaaagaattccccttctatcatttttattgatgaattagactcg
attgctccaaagagagaaaagacacatggtgaagtggagaggcgtatcgtttcacaactt
ttgactcttatggatggcctcaagagccgatcacacgttgtcgttattggagccacaaat
aggccaaatagtattgatcccgctttgagaaggtttggaaggtttgatcgggagattgac
attggtgtaccagatgaagttggaaggttggaggttcttagaattcatacaaagaacatg
aaactttcagacaatgttgatcttgaaaaagttggcagagatactcatggttatgttgga
tcagatcttgctgctctttgcacagaggctgcactacagtgtatccgggagaaaatggat
gtgattgacttagaggatgaaacaattgatgctgaggtgttgaattccatggctgtgacc
aatgaacactttcaaactgccttaagttcttcaaacccatctgccctgcgtgaaacggtt
gtggaggttccaaatgtttcctgggatgatattggaggcttagagaatgtcaagagggag
cttcaggagactgttcaatacccagtggaacatcctgagaagtttgagaaatttggcatg
tcaccttccaaaggtgttctcttttatggacctcctggctgtggtaaaaccctgcttgca
aaagcaattgctaatgagtgccaagccaactttataagtgttaagggacctgagttgctg
acaatgtggtttggtgaaagtgaggcaaatgttcgcgagatatttgacaaggctcggcag
tcagctccatgcgtgcttttctttgatgaacttgactctattgcaactcagcgaggcagt
tctgcaggggatgctggtggtgctgcagatagggtgttgaaccaactgttaacagaaatg
gatggtatgacagctaagaaaacagttttcatcattggggcaacaaacagaccagacatt
atagaccctgcattgctcaggccgggacgtctggatcaattgatttacatccctttaccg
gacgaaagttcacgtcttcaaatcttcaaggcatgcttgaggaagtcaccgatctcaaag
gatgttgaccttgcagctcttgcccgttttactcatggattcagtggtgcagacatcaca
gaaatttgtcaacgagcgtgcaaatatgccattagggaagatattgaaaaggatattgag
aaggagagaagaaaaagagaaaaccctgaagccatggaagaagatgacactgatgaggtc
cctgagataaagcctgcccactttgaagagtctatgaagtttgctcgccggagtgtcagc
gacgctgacatcaggaaataccagctctttgctcagaccttgcaacagtctcggggattc
ggatccgagtttcggtttccagatcgaaacgagaacactgcagcagatgcctcagaccct
ttctcatctgttacagctgagggagatgatgatttgtacagttag
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