Glycine soja (wild soybean): 114416757
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Entry
114416757 CDS
T06057
Name
(RefSeq) cyclic nucleotide-gated ion channel 17-like isoform X1
KO
K27629
cyclic nucleotide gated channel 17
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04075
Plant hormone signal transduction
gsj04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114416757
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
114416757
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsj04040
]
114416757
Ion channels [BR:
gsj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
114416757
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
114416757
NCBI-ProteinID:
XP_028237547
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Position
6:complement(27709884..27718388)
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AA seq
713 aa
AA seq
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MELKKGNLVRFYTDGRKHKDSLWGARATEPPGLKPSNLLPLGKNRIAETFRIGGSKVFPE
DHEPWRKRILDPGSEIVLKWNRVFIVSCLVALFVDPLYFYLPSVIENTGSSCVRTDLTLR
IVVTFLRTIADLFYLLHLIIKFRTAYVAPSSRVFGRGELVMDPKKIARRYIRSDFFIDFI
ATLPLPQMVIWFIIPATRSPQTDHKNNALALIVLLQYAPRLYLIFPLSSQIIKATGVVTK
TAWAGAAYNLLLYMLASHVLGAAWYLLSLDRYTTCWKSFCKKEHNPENCFLYLDCSSSNI
KLHEIWANSTNVFSSCDPSNDDINFKYGIFESAVKKHVVSSKFIPKYLYCLWWGLQQLSS
YGQNLETSTFIGETSFAIVIAILGLVLFSHLIGNMQTYLQSITIRLEEWRLKQRDTEEWM
RHRQLPEDLRSRVRRFVQYKWLATRGVDEEIILRALPADLRRDIQCHLCLNLVRRVPFFS
QMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRSGFFNSII
LRPGDFCGEELLSWALLPKSTINLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSK
KLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMTMKDLSLRESIPLDETVASEREHEDYAA
GSNSTRAKLNLGATILASRFAANTRRGALKIKDDMPQLQKPEEPDFSTEADDD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaaaaagggcaatcttgtcaggttctacacggatggcagaaagcataaggat
tcgctttggggagcaagagcaactgaacctccagggcttaaacctagcaatttgctacca
ttagggaaaaatagaattgctgaaacatttagaattggaggatcgaaggtattcccggag
gaccacgagccatggcgtaaaagaatacttgacccgggtagcgagattgtgttgaaatgg
aaccgggtcttcatagtttcatgcttggtggctctttttgttgatccattgtacttttat
ttgcctagtgtgatagaaaatacagggtcttcatgtgtaaggacagacctaacattgcgc
attgtcgtgacctttcttcgcactattgctgaccttttttatctgttgcacctgataatt
aagtttaggacagcatatgtggcaccaagctcacgggtgtttggcaggggtgaacttgtg
atggacccaaagaagattgcaaggagatatataagatctgatttcttcattgattttatt
gctacactccctctacctcagatggtcatttggtttattataccagcaacaagaagccct
caaactgatcacaaaaataacgcacttgcattgattgttttgcttcaatatgctccaaga
ttatatttgatttttccattaagctctcaaataattaaagcaacaggagtggttacgaag
actgcttgggccggagctgcatataatttgctgttgtatatgttagctagccatgtttta
ggggcagcatggtatcttctatccttggatcgatacactacatgttggaaatccttttgc
aaaaaggaacataatcctgaaaactgctttctttacctagactgcagttcttcaaatatt
aagctgcatgagatatgggcaaacagtacaaatgtgtttagcagctgtgatcccagtaat
gatgatattaatttcaagtatggaatatttgaaagcgcagtaaagaagcatgttgtttct
tcaaaatttatcccgaaatacctttattgtttatggtggggattgcaacaattaagttct
tatgggcagaacctagaaactagcacatttattggagaaacatcatttgctattgtcatt
gccatcttgggtcttgtattgttttcccatttgattgggaacatgcagacatatttgcaa
tcaattactataaggcttgaggagtggaggcttaagcaaagagacacagaggagtggatg
aggcatcgccaactccctgaagatttgagaagtcgtgttagacgatttgttcaatataaa
tggcttgctacgcgtggagttgatgaggaaatcattttacgtgcattgcctgctgatctt
cgccgtgatatccaatgccatttgtgcttaaaccttgttagacgagttcccttcttctca
cagatggatgatcaacttctggatgcaatatgtgagcggctggtatcgtctctgagcact
caaggaacctacattgttcgtgagggtgaccccgtgactgaaatgctttttatcattaga
ggtagactggatagttctactacaaatggtggccgtagtggtttcttcaactcaatcata
ctgagacctggagatttttgtggggaggaactactttcttgggctttactcccaaaatca
actattaatttgccttcttcaactaggacagttaaagccctaagtgaggttgaagctttt
gctctacgggctgaagacctcaagtttgttgctaatcaatttaggcgccttcacagtaag
aagctgcagcacacttttcgattttattcccaccattggaggacttgggcagcctgcttt
atacaggctgcttggcgccgatataagaaaaggatgactatgaaagatctcagtttgagg
gaatctattcctttagatgaaacagtagctagtgagagagaacatgaggactatgctgct
ggttcaaattcaactcgggctaaattaaaccttggggctacaattcttgcttcgagattt
gctgctaacacaagaagaggagctctaaagattaaagatgacatgccccagttacagaag
cctgaagaacctgacttttccactgaagctgatgatgattag
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