Glycine soja (wild soybean): 114416945
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Entry
114416945 CDS
T06057
Name
(RefSeq) TMV resistance protein N-like isoform X1
Organism
gsj
Glycine soja (wild soybean)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
WHD_ROQ1
TIR_2
LRR_14
C-JID
LRR_8
LRR_Zer-1
LRR_R13L1-DRL21
LRR_4
LRR_13
LRR_3
LRR_EndoS
AAA_16
nSTAND3
NACHT
AAA_18
MeaB
AAA_14
ABC_tran
Motif
Other DBs
NCBI-GeneID:
114416945
NCBI-ProteinID:
XP_028237794
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Position
6:complement(40566185..40570687)
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AA seq
1158 aa
AA seq
DB search
MAFTSNDVIQCTSSSSFEYDVFVSFRGEDTRNSFTGFLLQALKKEGIEAFKDDKDIRKGE
SIAPELIRAIEGSHVFLVVFSKGYASSTWCLRELAHIWNCIQTSPRHLLPIFYDVDPSQV
RKQSGDYQKAFAQHQQSFRFQEKEINTWREVLERVANLSGWDIRYKQQHAVIEEIVQQIK
NILGSKFSTLPYDNLVGMESHFAKLSKLICLGPANDVRVVGITGMGGIGKSTLGRALYER
ISHQFNSLCYIDDVSKLYQGYGTLGVQKQLLSQSLNERNLEICNVSDGTLLAWKRLSNAK
ALIVLDNVDQDKQLDMFTGGRVDLLRKCLGRGSIVIIISRDKQILKAHGVDVIYQVKPLN
DEDAARLFCRKAFKSNYIVSDFEKMTGDALLHCQGHPLAIEVLGSSLFDKDVSHWRSALA
SLRVNKSKNIMNVLRISFDQLEDTHKEIFLDIACFFNGRYVEGVKEVLDFRGFNPEYGLQ
VLIDKSFITATFKIHMHDLLCDLGKCIVREKSPTKPRKWSRLWDFKDFYKVMSDNMPAEN
VEAIVVQMNHHHGTTMGVDGLSTMSHLKLLQLESSIPDSKRKFSGMLVNLSNELGYLKWI
FYPFKCLPPSFEPDKLVELILRHSNSKKLWKGRKPLPNLRHLDLSHSKNLIKMPYIGDSL
YLETLNLQGCIQLKEIGLSIVLSRRLSYLDLKDSKCLINLPRFGEDLILQILVLEGCQKL
RHIDSSIGLLKKLRRLDLKNCKNLVSLPNSILGLNSLECLNLSGCSKLYNIQLLYELRDA
EHLKKIDIDGAPIHFQSTSSYSRQHKKSVGCLMPSSPIFPCMCELDLSFCNLVQIPDAIG
IICCLEKLDLSGNNFVTLPNLKKLSKLFSLKLQHCKKLKSLPELPSRIDLPTDAFDCFRL
MIPSYFKNEKIGLYIFNCPELVDRDRCTDMALSWMILISQMSLLYQVQFKLPFNRRIQSV
TTGSEIPRWFNNQHEGNCVSLDASPVMHDDNWIGVAFCLMFVVPHETLSAMGFSDSDCPP
WHSFGDIPVDFYGDLDLELVLDKSDHMWLFFVSRTQFSRQFSLKLKYLGRLVLKCDKGMG
WSESYAEVKKYGYRWVYKEDKEEPSNPLARKRKFEEIEENEGKRKKGIISAEGRKDDATS
SQEKTIKLLQNEFENLSL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacttctaatgacgtcatccaatgcacctcttcttcttcgtttgagtatgac
gtgtttgtgagcttccgcggtgaagacacacgcaacagcttcaccggttttcttcttcaa
gctctgaaaaaagaaggcatcgaggccttcaaagatgataaagatatcaggaaaggcgaa
tccatagcaccagagctaatacgagccattgaagggtctcatgttttccttgttgtcttt
tccaagggctatgcttcctcaacttggtgcctgcgtgaactagcacatatctggaattgc
attcaaacatcacccagacatcttctgcctattttttatgatgttgatccatcacaagtg
cgaaaacagagtggagactatcagaaagcctttgcccaacaccaacaaagtttcaggttc
caagagaaggaaattaacacatggagagaagttctggaacgagtagccaatctctctggt
tgggatatcagatataagcaacaacatgcagtgattgaagaaattgtccagcagataaaa
aatatcttgggttccaaattttcaactcttccatatgataatctagttgggatggaatct
cattttgctaaattatcaaagctaatatgtctgggaccagctaatgatgttcgagttgtt
ggaattactgggatgggtggaataggaaagtcaactcttggtcgagctttatatgaaaga
atctctcatcaatttaattctctttgttatattgatgatgtaagtaaactttatcaaggt
tatggtacattaggtgtacaaaaacagttactttcacaatctctaaacgaaagaaatcta
gagatttgcaatgtatctgatggaacacttctggcatggaagaggctatccaatgcaaag
gcacttatagttcttgacaatgtagatcaagataaacaacttgatatgtttacaggaggt
agagttgacctgttacgtaaatgtctaggtagaggaagcatagtcattataatttctaga
gataaacaaatattgaaagcacatggagtagatgttatttaccaagtgaagccattgaat
gatgaagatgctgctcgattgttttgtagaaaagcattcaaaagtaattatattgtgagt
gattttgaaaagatgactggtgatgcactattacattgtcaaggtcatcccttagcaatt
gaagtattgggctcatctttgtttgataaggatgtttctcattggagaagtgcattggct
tctctaagagtaaataaaagtaaaaatattatgaatgtgttgcgaataagttttgatcaa
ttagaggatacacacaaggaaatatttcttgatattgcttgtttcttcaatggtagatat
gtggaaggtgtgaaagaagttctagattttcgtggatttaatccagaatatggcctacaa
gttctcattgataaatcatttataaccgcgacatttaaaattcacatgcatgacttgtta
tgcgatttaggcaagtgtattgtaagagaaaaatcacctacgaagccaagaaagtggagt
aggttgtgggattttaaagatttctacaaagttatgtcagacaatatgccagcagaaaat
gtcgaggccattgtagttcaaatgaatcaccatcatgggacaacaatgggggttgatggt
ctatcaacaatgagtcaccttaagttacttcaacttgaaagttctattcctgattcaaaa
aggaaattttctggaatgcttgttaatctttccaatgaattagggtatcttaaatggatt
ttctatccttttaagtgtttgccacccagttttgagccagacaaacttgttgagttgatc
ttgcgtcatagcaacagcaaaaaactttggaaaggcagaaagcctctacccaatttgagg
catttggatctctctcactccaaaaatctaattaaaatgccatatattggagattcccta
tatcttgagacgcttaatctccaaggatgtattcaactcaaagagattggtctgtccatt
gttctttcacgaaggctttcttatctggatttgaaagatagcaaatgtcttatcaatttg
ccacggtttggagaggacctaattcttcaaatcctagtactcgaaggatgtcaaaaactc
agacacattgattcatccatcggtcttctaaaaaagctcagaagattggatttgaaaaac
tgcaaaaatctagtaagcttacccaatagcatactaggcctcaattctcttgaatgtctg
aatctctctggctgttcaaaactgtacaacatccagttattatatgaactaagggatgca
gagcatttgaagaagattgatatagatggagctcctattcatttccaatcaacatcttcc
tactccagacaacataaaaaatcagttgggtgcttaatgccttcctcgccaatttttcca
tgtatgtgtgaacttgatctaagtttctgtaatttagttcaaattcctgatgctattgga
attatatgttgcttagaaaagctagatttaagtggtaacaattttgttacactgcccaac
ctcaagaagctttccaaactgttcagtttaaagttacaacattgcaagaagttgaaatct
ttgcctgagctcccttcacggattgacttgccaactgatgcattcgattgttttaggcta
atgattccatcttatttcaagaatgaaaaaataggattatacatttttaactgcccagaa
ttagttgatagggatcgctgcactgacatggctctttcatggatgatactaatttctcag
atgtctctgctgtaccaggtgcaattcaaacttccttttaaccggaggattcaaagtgtt
accactggaagtgaaataccaaggtggttcaataatcagcatgagggaaattgtgtaagc
ttagacgcatctcctgttatgcatgacgataattggattggcgttgcgttttgtttaatg
ttcgtggtacctcatgaaacactctcagcgatgggtttttcagattcagattgcccacca
tggcattcttttggtgatattccagtggatttttatggagatctagatctagaacttgtt
ttagacaaatcagatcacatgtggctattctttgttagtcgaacacaattcagtagacaa
ttctctctcaagctcaaatatcttggcaggttggttttgaaatgtgataaagggatgggc
tggagtgagtcatatgctgaggtgaagaaatacggatatcgctgggtatataaagaggat
aaagaagagccatcaaatccattggctaggaagcgcaaatttgaggaaattgaagaaaat
gaaggaaaaagaaagaaaggaataatctcagcagaagggagaaaagatgatgcaacctcc
tcccaggaaaagacaatcaagttgttgcaaaatgaatttgaaaatcttagcctgtag
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