Glycine soja (wild soybean): 114417339
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Entry
114417339 CDS
T06057
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03030
DNA replication
gsj03410
Base excision repair
gsj03420
Nucleotide excision repair
gsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114417339
03410 Base excision repair
114417339
03420 Nucleotide excision repair
114417339
03430 Mismatch repair
114417339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsj03032
]
114417339
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114417339
DNA replication proteins [BR:
gsj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114417339
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114417339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
AAA_22
RCF1-5-like_lid
PTCB-BRCT
Rad17
AAA_19
AAA_assoc_2
AAA_30
nSTAND3
RuvB_N
BRCT_2
AAA_5
AAA_33
AAA_14
Zeta_toxin
Sigma54_activ_2
AAA_18
TsaE
AAA_17
RNA_helicase
AAA_16
NTPase_1
RsgA_GTPase
Gp44_lid
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
114417339
NCBI-ProteinID:
XP_028238303
LinkDB
All DBs
Position
6:complement(47100448..47110911)
Genome browser
AA seq
938 aa
AA seq
DB search
MSDIRKWFMKTHDKGNNAASSKPSSDKPQSEKTVAGGQESSGRRITSKYFNSNKQKGKDE
KEKQELPAKRKNAKDSEEIHEDDGDDSVLPTNKKKLADTTPTKKLKSGSGRGIPKKSAVL
EESDEDDDKDAVSAAKSAGRGGGGGGRGAPGRSTGGRGRGGGRGGFMNFGERKDPPHKGE
KEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGG
RKSEKAKELGTSFLTEDGLFDMIRASKPAKASSQEDKKLVNKAVAVASQSKVSPKSQVKV
PLSSRSPSKQAKPKTATTVQSSSMWTEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLD
TGNKKQGKKQNDSGLKKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNASDSRGKADSKI
EKGISGSKTNSVKELVTNEAIGVNMERSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKI
SKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVSKAERLQVNEIALEEL
AERVNGDMRMALNQLQYMSLSMSVINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKL
KMDERINLSMSDPDLVPLIIQENYINYRPSLAGKDDSGIKRMNLIARAAESIADGDIVNV
QIRRYRQWQLSQTSSLATSIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLL
DDLHVHILASRESSSGRDTIRMEYLTLLLKEMTEPLRTLPKAEAVQQVVELMNTYSISQE
DFDTIVELSKFKGHPNPLDGIQPAVKSALTKAYKEQSSSRVVRVADLITLPGVKKVPKKR
IAAILEPAGEEVEKGEGDTLDESEEENSSDNEELEGTKGEKLQSELQSYNSKATQIQLEL
KGTGNSSSKKTSGGRGKGASASGKKVAQAPKTTAKRKW
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatataaggaagtggttcatgaaaacacatgacaagggcaacaatgccgcttct
tccaagccttcttccgataaaccccagtccgagaaaacggtggctggaggtcaggaaagt
tcagggaggaggataactagcaaatattttaattcgaacaagcaaaaggggaaagatgag
aaagaaaagcaggagctccctgctaaaagaaagaatgcgaaggacagtgaggaaattcat
gaagacgatggagatgactctgtcttgcccactaataaaaagaagttagctgacaccact
ccaacaaaaaaattgaagagtggatcaggtagggggattccaaagaaatctgcagttttg
gaagaaagtgatgaagatgatgacaaagatgctgtgtctgctgctaaatctgctggaagg
ggtggtggtggtggtggaagaggagcaccggggcgatcaactggtgggagaggtagaggg
ggtggtaggggtggattcatgaattttggagaaagaaaagatcctccacacaaaggagaa
aaggaagtccctgaaggtgctcctgactgtttagctggcttgacttttgtgatcagtgga
acactggacagtttggaacgagaagaagcagaagatttgattaaacgccatggtggccgt
gtcactggatcagtcagcaagaaaacgaattatctgttatgtgacgaagatattggggga
cggaagtctgaaaaagccaaagagctaggaacttccttcctcacagaggatggattgttt
gatatgattcgtgcctcaaaacctgcaaaagcttcttcacaagaagacaagaaacttgtg
aacaaggctgttgcagtagcatcccagtcaaaagtttctccgaaatcacaagttaaggtc
cctctgtcttcacgctcaccttctaaacaagccaagccgaaaactgctactactgttcag
tcttcttcgatgtggacagaaaaatatcgacctaaagatccaaaggatatcatagggaat
cagtcacttgttttacagcttcgtaattggttgaaagcttggaatgagcattttttggac
actggtaacaaaaagcagggaaaaaagcaaaatgactctggtttgaaaaaagctgtcttg
ttaagtggaactcctggtataggaaaaacaacttcagcaaagttggtctgccaggagctt
ggtttccaagccatagaggtaaatgctagtgacagccgtggaaaagctgatagcaaaatt
gaaaaaggaattagtggaagcaaaacaaattccgttaaggaacttgtaaccaacgaggcc
attggtgttaatatggaacggtcaaagcattacaaatctgtgcttattatggatgaggtt
gatgggatgtcagctggtgacaggggtggtgttgctgatcttattgctagcatcaagata
tcaaaaattcctattatctgcatttgcaatgaccgttacagccagaaactgaaaagcctt
gtgaactactgtttgcttctaagttttcggaagcctacaaagcaacagatggcaaagagg
ttgatggatgtttcaaaggctgaaagacttcaagttaacgagattgcacttgaggaacta
gcagaaagagttaatggagatatgcgaatggcactaaaccagttacagtatatgagcctc
tctatgtcagttatcaactatgatgatattaggcagcgctttcttaccaatgcaaaagat
gaagacatttcaccattcacagctgttgataagctttttggttttaatgctgggaagttg
aaaatggatgagaggataaatctcagcatgagtgatcctgatcttgttcctcttattatc
caggaaaattatattaattatagaccaagcttggctggtaaggatgatagtggcataaaa
cgcatgaacctgattgcccgtgctgctgagtctattgctgatggggatatagtgaatgta
cagattcgcagatatagacagtggcagctctctcaaactagttcccttgctacaagcata
attcctgcatcattgttacatgggcaaagggaaatacttgaacagggagaacgaaatttc
aaccggtttggtgggtggctgggaaagaactcaacaatgggaaaaaacctaaggcttttg
gatgatcttcatgttcacattcttgcttctcgtgaatctagttcgggaagggataccatt
cgcatggaataccttactcttcttcttaaagaaatgacagagcccctgcgaaccctgcct
aaggctgaagcagttcagcaagttgtggaattgatgaatacatactctatcagtcaagaa
gattttgatactatagtagagttatcaaaattcaagggtcatcctaatccactagatggc
atacagcctgccgttaagtcagccttgacaaaagcatacaaagagcaaagctcatctcgg
gttgttcgagttgcagatctaatcactcttccaggggtaaaaaaggtccctaagaagcgt
attgctgctattctggaaccagctggtgaagaagtggaaaaaggtgaaggtgacacctta
gacgagagcgaagaagagaacagctctgataatgaagagttggagggcaccaagggtgag
aagctgcaatcagaacttcaaagctataattcaaaggccacgcaaattcagttggaactg
aagggaacgggaaattcaagttccaagaagacatcgggtggtagaggtaaaggtgcttct
gcatctgggaagaaggttgctcaagctccaaagactactgcaaaaagaaaatggtga
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