Glycine soja (wild soybean): 114417372
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Entry
114417372 CDS
T06057
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114417372
03036 Chromosome and associated proteins [BR:
gsj03036
]
114417372
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114417372
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
114417372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
Tex_central_region
HHH_9
HTH_44
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
114417372
NCBI-ProteinID:
XP_028238344
LinkDB
All DBs
Position
6:47429457..47439487
Genome browser
AA seq
1625 aa
AA seq
DB search
MGRRRRRETFPHEEDEREKIRKKGKIKESVTFEVDDDDEEDLDVFENDGFIVDDAEDDEE
EEGENKKQAQKKKKERKSLKNIVLDDEDLELIRENKSFNQETLRDGKFKRLRKAGVDSEL
MEYSSDDGVSLFDDIAEDETNDDVEDDMADFIVDDEDVIYGKGDSLRQKKLKGIKNSPAF
SKDKHSFGKEGQLENHIGKVQIHATKSDDPNKYKSFIPTDMHTAGEDNCVNDMDIPERMQ
IIQDIVGSAIDRMSIEEESSWILCQLASNINPLFNEAKSCRLVNTAKREDIISFLELHHT
MKYDIPFIAMYRKEQCLSLLEDPKAEELENIFNDIERKPMLKWHQMLWIIQELDKKWLFL
QKRKSLLMEYYNKHFEEEREMSFLVDESSFHKQIFDSITNMLKKAETESEIDDIDRKFNL
HFPPAEVFLDSGFKRPLTKSYYTNCNKAGLWSLANKFGDPEKFGSLVTLEKVGTNSEEDP
QESPEEIASMYKCQTFQTTEAVLKGARHMAAVMLSSEIPFRKYVRTIFMDKALVSTSPTI
KGNTTIDSFHEFAGVKWLRDKPLSKFEDSQWLFIQKAEEEKLLQVKIELPDHTINELTMT
CKDSYLKDGEGISTRIWNEQRKLIMQDAISNFLLPAMEKDARALLNAKAKNWLLMKYAKE
VWNRVSVAPYLKNESDTAQKNGVMACCGGNGKPGTSFVMLDSGGKLVDVMHARSLTLRSL
NIIDQQSKKNDQQCVLKFLTTYQPRVIVLGADNAFCLRLREEINEIISMMSEHNVQNFSQ
QMEGVPPVVLGDEGLPRLYEDSKISENQLPRQHGIVKRAVALGRYLLNPLAMVATLCGVK
NEIVSWKLNTLEKFLTSDEKLEIIEWVMTDVTNQVGIDINLAIRHDWLLAPLQFVSGLGP
KKAGVLHRELLGGTDVRNRRDLAKFGLDKEKVFCNAVGFLKVSCDEENFVDNGSNTLDHT
RIHPESYNLSEELALAVYKKHVPDPEANFSGVNAIEYIQNDPNLLENFDLNEYADRLEIE
KGEYKRITLIDIKMELLHGFKDPRIPYTELTQEEEFYMITGETGDALVEGKRVQATVRNV
MSKQAFCVLDSGMTGVLFKEDFSDETENISLTDKLHQGAVLTCKIKLIDKNKCWVNLTCK
LSELKNDGEQGFHDMDPYYHEGNIISISQVERADKMELGTKNFKPRMISHPNFQNITADQ
AKQFLADQEVGEYIFHPSSRGLSFLILSIKIFNGVYVHKDIVEGGKSQNLPELGETLKIG
EETFKDINQVIEHYVNPLVVHLKDMINFRKFKKGTKAEVDELLKLEKDEYPNRIAYGFGI
SYEHPGTFILSYIRSRNPHHEFVAIQRKGFKFRKQIFKNIEQLVAYFQNHINDNVAPAKS
CIAVGSFRESLSGGWRSNNVDQHTESIAYNDSGNGSNAGCGRGRGGRGRGRDRGGCGRGH
DSGGCGRGFGHRSGSRDYFNGDDNDGSSFPSSNWGSGSRDSPDDSFGAGKSWEVRGSGEG
NGGRQGRGRGRGRGRGSRGSQGDGQGRVPWGGNSHERGGYSDGNSDSGWGQGQDQGRGSD
GNGQGRGRWGGNNSNEERNKDEESRGNGSWGFGNAGSGNENSGRGKNATPSGDGSGWGGT
GGSSW
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaagaagaagaagagaaacgtttccacacgaagaagatgagcgagagaaaatc
agaaagaaaggaaaaatcaaagaatctgttaccttcgaagttgacgacgacgacgaggaa
gacttggatgtttttgagaatgatgggtttattgttgatgatgccgaagatgatgaggag
gaagaaggagaaaataaaaaacaagcacaaaagaagaaaaaagagaggaaatcattgaaa
aacattgttcttgacgatgaggatcttgagttgattcgcgagaacaagagcttcaatcaa
gaaacattgagagatggaaaattcaagaggcttagaaaggctggtgtagactctgagctg
atggaatactcttctgatgatggagtatcactctttgatgatattgctgaagatgagact
aacgatgatgtagaggatgacatggcagattttatagtggatgatgaagatgtcatctat
ggtaagggagattctctcagacaaaaaaagcttaaaggcataaaaaattcgcccgcattt
tcaaaagacaaacatagttttggcaaggaaggtcagctggaaaaccacattgggaaagtt
caaattcatgctactaagtctgatgatcctaacaagtataaatcattcatccctactgac
atgcacacagctggagaggataactgtgtaaatgatatggacatacctgagagaatgcag
ataattcaggacattgtaggatctgcaattgacagaatgagtatagaagaagaaagttca
tggatactatgtcaactagcatccaacataaatccattgttcaatgaggctaaatcctgc
agattagtcaatacagcaaaaagggaagatattattagtttcttggaattgcatcataca
atgaaatatgatattccatttattgcaatgtaccggaaggaacaatgccttagtcttcta
gaagatccaaaagcggaagaattagaaaacatattcaatgatattgaaagaaagcctatg
ttgaaatggcaccagatgctctggataatacaggaattggataaaaagtggttgtttctt
caaaagcggaagagcttgctcatggaatactataacaaacattttgaggaagaacgcgaa
atgtctttccttgttgatgaatccagttttcataagcagatatttgattcaatcaccaat
atgctcaagaaggctgaaactgagagtgagattgatgatattgataggaagtttaatttg
cattttccaccagctgaggtgtttcttgatagtggttttaaaaggcctctgacaaaatca
tactacaccaattgcaataaggcagggctgtggtcacttgcaaacaaatttggcgatcct
gagaaatttggttctttagttactcttgagaaagtgggaacaaatagtgaagaagatccg
caggaatctccagaggaaatagcatcaatgtacaagtgtcaaacctttcaaactacagaa
gctgtacttaaaggggctagacacatggctgcagtgatgttaagcagtgagattcctttc
aggaaatatgtgcgcaccatatttatggataaggcattagtttcaactagccctacaata
aaaggaaatacaacaatagattcctttcatgaatttgctggtgttaagtggctgcgggac
aaacctctctcaaagtttgaggattcccagtggctattcattcagaaggctgaagaagag
aaacttcttcaagttaaaatagagttgcctgatcataccataaatgaattgacaatgact
tgtaaagattcctatctcaaagatggtgaaggaatatctactaggatttggaatgaacag
cgtaaattaatcatgcaggatgccatttcaaatttccttttgcctgctatggaaaaggat
gctcgggcattgttaaatgctaaggctaaaaactggttattaatgaagtatgcaaaggaa
gtgtggaacagagtctctgtggcaccgtatttgaaaaatgaaagtgacactgcacagaag
aatggagtcatggcttgttgtgggggaaatggaaagccaggtacctcatttgtcatgttg
gattctggaggaaaattggttgatgtgatgcatgctcgttcacttacactacgatctctg
aatatcattgaccagcagagcaagaaaaatgatcaacagtgtgtcctaaagttcctaaca
acttatcaaccacgtgttattgtactgggagcagataatgcattctgtttaaggttgagg
gaggagattaatgagattatttcaatgatgtcggagcacaatgttcaaaactttagtcaa
caaatggaaggagtgccaccagttgtgttaggggatgaaggcttgcctcgtctttatgaa
gattcaaaaatttctgagaaccagcttcccagacaacatggcattgtcaagagagctgtg
gctcttggacgttaccttctaaacccgctggctatggtggcaacattatgtggagtgaaa
aatgagattgtgtcatggaagttgaacaccctggagaaattcctaacaagtgatgagaag
ttagagataattgaatgggtcatgacagatgttacaaaccaagtaggcatagacataaat
ttggccatccgacatgactggctgctagctcctttgcagtttgtttctggtcttggaccc
aagaaagctggcgtgttgcatagagaattacttgggggtactgatgtgagaaatagaagg
gatttggctaaatttgggctggataaagagaaggttttctgcaatgctgttggcttttta
aaggtttcttgcgatgaagaaaactttgttgacaatggtagcaatactcttgatcataca
agaattcatccagagtcgtataatctttctgaggaattagcattagctgtttacaagaaa
catgttcctgatccagaagctaatttttctggagtgaatgcaattgaatacattcaaaat
gatccaaacctgcttgagaattttgatttaaatgaatatgctgatagattggaaatagaa
aaaggtgaatacaaaaggattactcttattgacataaagatggaattacttcatggattt
aaggatcctaggattccctatacggaactgactcaagaggaggaattctatatgataact
ggagaaactggggatgcactagttgaaggaaaaagagttcaggcaacagttcgtaacgtg
atgtctaaacaggcattttgtgtgcttgactccggaatgactggagtactttttaaggag
gacttttcagatgaaactgagaatatctctttaacagacaaattgcatcaaggtgccgtg
cttacatgcaagatcaaactaattgataagaacaaatgttgggtcaatctgacttgtaaa
ttgagcgagctgaagaatgatggtgagcaaggtttccatgacatggatccttattatcat
gaaggaaacatcatttcaattagtcaggtggagagagcagacaaaatggagcttggaact
aaaaatttcaagcccaggatgatttctcaccccaattttcaaaatataactgcagatcaa
gcaaaacagttccttgcagatcaggaagttggggaatatatttttcacccaagttcaagg
ggtcttagttttttgatcctgtctattaaaatttttaatggagtttatgtacacaaagac
attgtggaaggtggcaagagtcaaaacttgcctgaacttggagagacattaaaaatagga
gaggaaacatttaaggacataaatcaggttattgaacactatgtcaatccattggtagtt
catctgaaagatatgattaatttccgaaaatttaagaagggcacaaaagctgaggttgat
gaactcttaaaacttgagaaggatgaatatccaaataggatagcatatggctttggcatt
tcatatgagcatcctggcactttcatcttgtcttacattagaagtagaaatccacatcat
gagtttgttgctatccagcgaaagggattcaagtttaggaagcaaatattcaaaaatatt
gagcagctggtggcatattttcaaaatcatatcaatgataatgttgcacctgcaaaatcc
tgcatagcagttggatcatttagggagtccttgtctggaggatggagaagcaacaatgta
gatcagcacactgaatcaatagcttacaatgacagtggaaatggtagtaatgctggttgt
ggccgtggccgtggaggccgtggacgaggccgcgaccgtggaggctgtggacgtggccat
gatagtggaggttgtggacgtggatttggccatagatctggctctcgtgattattttaat
ggtgatgacaatgatggaagtagttttccaagttcaaattggggctctggttctagagat
tcccctgatgattcctttggtgcaggtaagagttgggaagtgaggggttctggagaaggc
aatggcgggagacaaggtaggggtaggggaaggggaagaggaagaggaagtagaggaagc
caaggtgatggccaaggacgtgttccttggggtggaaatagccacgagagaggtggttat
agtgatggcaatagtgatagtggttggggacaaggtcaggatcagggaagaggaagcgat
ggtaatggccaaggacgtggtcgatggggtggaaacaactcaaatgaagaaaggaacaag
gacgaagagagcagaggaaatggcagttggggattcggtaatgctgggtcaggaaatgag
aactcaggaagggggaagaatgcaactccctctggtgatggcagtggatggggagggaca
gggggtagtagttggtaa
DBGET
integrated database retrieval system
