Glycine soja (wild soybean): 114417404
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Entry
114417404 CDS
T06057
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114417404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114417404
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
114417404
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114417404
Multi subunit type E3
ERAD complex
114417404
LMBR1L-GP78-UBAC2 complex
114417404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
CUE
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_4
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-RING_16
U-box_ZFPL1
zf_RING_Vps8_fungal
zf-RING_Vps41
PHD
E3_UbLigase_EDD
RINGv
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
114417404
NCBI-ProteinID:
XP_028238393
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Position
6:47819553..47829384
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AA seq
586 aa
AA seq
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MALRVIVISAVSTVLSFVGLQFCTDLSLDKLTSDGLIGWNLIHLDNASQDIELPLGLYTT
IGLLVNCMINVFILLNLCLKAVFFTELYASETRKLVERFINYVIYKGMFLPLIVPPTIYQ
AGLWSTWLTVLCSLKMFQALARDRLERLNASPSATPWTYLRVYSALLFVFMVDVLWIRFC
LTIYQAHGSSMYLLLFFEPFSICFETLQAILVHGFQLLDIWLHHSACNSSDFRTPKLLDM
LTAGSLLELKGILIRNLGFLLDMATFFMALGHYLYIWRLHGMAFHLIDALLFLNIRALLS
AIINRIKGFIRLRIALGTLHAALPDATTEELRAYDDECAICREPMAKAKRLNCNHLFHLA
CLRSWLDQGLAEMYTCPTCRKPLFAGVPGNETNSDAGTISSDEQLARQISAGLDRPNSAR
HTMPTGFYPNQTLNTPEGVPWRGAGLDSGWLHSWPNQGVDGAGPSTAIRTVGLGRVQMMM
RHLASVGETYAQTTLEDTAWNLWPINPSQASASGSTIPPPGGRLPERTGSLHLRTASQSS
NDNVANILAMAETVREVLPHIPDDMIFQDLQRTNSVTVTVNNLLQM
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctttgagggttatagtgatttcggcggtttctacagtattaagctttgtgggtctg
cagttttgcacagacttgtctttggataaacttacatcagatggactgatcggctggaat
ttaattcacttggacaatgccagccaagacattgagttgcctttgggtttgtacaccacc
atagggctactggtgaattgcatgatcaatgtatttatccttctcaatctttgcctcaag
gcagtgtttttcacggagttatatgcttctgaaactcgtaaactggttgaacgtttcatt
aattatgtcatttacaaggggatgtttctaccattgattgtgccaccaacaatttatcaa
gcaggtctttggtcaacttggttgactgtgctttgttctttgaagatgtttcaagctttg
gctagagatcgtttggaacggctgaatgcatctccgtctgctacaccctggacatatctt
cgagtatattcagcattgttatttgttttcatggttgatgttctctggataaggttttgt
ctgacaatatatcaagcacatgggtcctctatgtatctgttattattctttgagcctttc
agtatttgttttgagaccctacaggctattttggtacatggatttcagttgcttgacata
tggttgcatcattcagcttgcaatagcagtgatttccgaacacctaaactgcttgacatg
ttaactgcaggttcattgttggaattgaagggaattctcattcggaacttgggattttta
ttagacatggcaacattttttatggcacttggccattacttgtatatatggcggcttcat
ggcatggctttccatctaatagatgcattgctatttctaaatatacgtgcattgcttagt
gcaataataaatcgcataaaaggctttatcaggctaaggatagctctaggaacacttcat
gcagctcttcctgatgcaacaactgaggagctaagagcatatgatgatgaatgtgctatt
tgtagagaaccaatggccaaggctaaaaggctaaactgcaatcatctcttccatcttgca
tgtttgagatcttggttggatcaaggcctggctgagatgtatacttgtccaacatgccga
aagccactttttgcgggtgtgcctggaaatgaaacaaactctgatgcggggacgatatct
agtgatgagcaacttgcacggcaaataagtgctggattggatcggccaaactctgctagg
cataccatgcctacaggattctatccaaatcagacactaaacactcctgaaggtgttcct
tggaggggtgcagggctggactcaggttggttgcattcttggccaaatcaaggtgttgat
ggggccggtccatctactgctatcagaacagttggattaggaagagttcaaatgatgatg
cggcatcttgcatctgttggagaaacctatgctcagactaccttagaagataccgcgtgg
aacctttggcccattaatccctctcaggcttctgcaagtggttcaaccattcctccccct
ggtggaagattgcctgaaagaactggtagtttacatttaaggactgcttcacagtcttct
aatgataatgttgcaaatatacttgccatggctgagactgttcgggaggttctacctcat
attccagatgacatgatattccaggacttgcaaaggacaaattcagtcacggttactgtg
aataatctcctccaaatgtga
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