Glycine soja (wild soybean): 114417661
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Entry
114417661 CDS
T06057
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Module
gsj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114417661
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114417661
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114417661
NCBI-ProteinID:
XP_028238562
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Position
7:complement(14746575..14753569)
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AA seq
388 aa
AA seq
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MQSLDTCVFILAFIISPYLCHSVGTNTIYNVINYGAKGDGRSDDSQAFLRAWQSTCGAQG
AATLLIPPNRVFLVSSLILKGPCSAAIQIQLRGKIVAPAKDAWVGGYKYTWILISNINGL
TIEGNGGLLDGDGSTWWACKNCPRPAVLSFQSCNRLSVSYLNIINSPRAHIGINQCQGAI
FSNINIHAPGNSPNTDGIDINSSQNIMIRDSFIASGDDCIAITGSSSYINVTGIDCGPGH
GISIGSLGRNYDTIQEVHVQNCKFTSTTNGARIKTFAGGSGYAKRITFEEITLIQARNPI
IIDQFYVGEDDLTNGEVQVSDVTFRGFRGTCTYDQAIDLSCGPLGCFNIILDQNNIVSSQ
PGKQAYCSCKNAHGSVRSSVPNCPCLVP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcctagacacttgtgttttcattcttgcctttattatttcaccatatttatgt
catagtgttggtaccaacacaatttataatgtgataaactatggtgctaagggagatggc
agatcagatgattcacaagcctttttaagagcatggcaaagcacgtgtggagcacaagga
gcagcaactctacttataccaccaaacagagtattcttggtgtcaagcttaatactaaag
ggtccttgctccgccgcaattcaaattcagcttcgagggaaaatagttgcacctgcgaaa
gatgcttgggtaggaggatataagtatacttggattttgatctcaaacataaacggtctt
acaattgaaggaaatggaggattacttgatggcgatggttccacatggtgggcatgcaaa
aattgtccacgaccagcggtcctttctttccaatcatgcaatcgtcttagtgttagttac
ttgaacatcattaatagtccaagagctcacataggcataaatcaatgtcagggagccata
ttctctaatattaatattcatgctcctggtaatagtcccaacactgatggaattgatatt
aattcttcccaaaatatcatgataagagattcctttatagcatctggtgatgattgtatt
gccatcactggtagctcctcttacatcaatgttactgggattgattgtggaccaggccat
ggaataagcattggcagcctgggtagaaattatgatacaatccaagaagttcatgtacaa
aactgcaagttcacgagcactacaaatggagcaagaatcaagacatttgcaggtggatca
ggttatgcaaaaagaataacttttgaggaaatcacattaatacaggctcgcaacccaata
attatagaccaattctatgttggtgaggatgatttaacgaatggagaagtccaagtgagt
gacgtaacattccgtggatttcgaggaacatgtacatatgaccaagctattgacttaagt
tgcggcccattaggttgtttcaacattatattggatcaaaataacattgtctcttctcaa
ccaggaaagcaggcttattgttcttgtaagaatgcccatggaagtgttagatccagtgtt
ccaaattgtccttgcttagtaccatga
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