Glycine soja (wild soybean): 114417954
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Entry
114417954 CDS
T06057
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
gsj04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114417954
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114417954
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114417954
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114417954
03036 Chromosome and associated proteins [BR:
gsj03036
]
114417954
Protein phosphatases and associated proteins [BR:
gsj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
114417954
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
114417954
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
114417954
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR3_1st
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Me-amine-dh_H
ComGF
Motif
Other DBs
NCBI-GeneID:
114417954
NCBI-ProteinID:
XP_028238847
LinkDB
All DBs
Position
7:923545..936940
Genome browser
AA seq
515 aa
AA seq
DB search
MNGGDEVVAAPAGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGG
RVVLFERTDTKDHHGSRRDLERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMNVDPKAMGNGSIASSSNSSSSKS
YLANGVSPDGPYNYLNNDFSFPPEGVPSLRLPLVVTSHETSLVARCRRVYAHAHDYHINS
ISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTL
AYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILS
RDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVSTGSY
SNLFRVFGCVPGSTEAMTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGAESASVDAN
GNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatgaggtcgtggcagctccggcgggtccaccgcagccgctggagtgg
aaattctcgcaggttttcggggaacgtacggcgggggaggaagttcaggaagtggatata
atttctgctattgaatttgacaagtctggtgatcatcttgctactggtgatcgtggtggt
cgagtagttctctttgagcggacagatacaaaagatcatcacggatcaagaagggacttg
gagaggatggactattctattagtagacatcctgagttccgttataaaacagagtttcag
agtcatgagcctgagtttgactatcttaagagtctggaaatagaagagaaaattaacaaa
atcaaatggtgccaaacagctaatggtgctttgttccttctatccacaaatgataaaacc
atcaaattttggaaggttcaagaaaagaaggtcaagaaagtttctgacatgaatgttgat
cctaaagcaatgggaaatggctctattgctagttcaagtaattccagtagctccaaatca
tatcttgcaaatggagtatctccagatggaccttacaattatttaaacaacgatttctca
tttccaccagaaggcgtaccttctctaagattaccattggtagtaaccagccatgagacc
agtttggtggctcgatgtcgtagagtatatgcccatgctcatgattatcatattaattct
atttcaaataacagcgatggagaaactttcatatcagctgatgatttacgaataaatctt
tggaacctggaaattagcaatcaaagttttaatattgttgatgtaaagcctgcaaatatg
gaggatctgactgaggttataacatcagcagaatttcaccctacacattgtaatacattg
gcatatagcagctcaaagggttcaattcgtcttgttgacttgcggcagtcagcattatgt
gattctcatgccaaactatttgaggaacaagaagcccctgggtcacgatcatttttcaca
gagattattgcctcaatctcagacataaaatttgggaaggatggaagatatatacttagt
cgtgattacatgaccttaaagttatgggacatcaatatggattctggtccagttgcaaca
ttccaggttcacgagtatttaaggccaaagctttgtgatttatatgaaaatgattcaatt
tttgataagtttgagtgttgtctaagtggtgatggattgcgtgtttcaactggttcttac
agcaatctattccgtgtgtttggttgtgttcctggaagtactgaggctatgactttggaa
gccagtaaaaatccaatgaggcgtcaagttccaaccccttcaaggccatctagatcactg
ggaaacagtataacaagagttgtaagacgtggagcagaaagtgccagtgtcgacgcaaat
gggaattcttttgatttcacaacaaagttgctgcacttagcatggcacccaactgagaat
tcaattgcttgtgctgctgcaaatagcttatacatgtactatgcttaa
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