Glycine soja (wild soybean): 114417979
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Entry
114417979 CDS
T06057
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114417979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114417979
Enzymes [BR:
gsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
114417979
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
114417979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
114417979
NCBI-ProteinID:
XP_028238886
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All DBs
Position
7:1189991..1195174
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AA seq
704 aa
AA seq
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MGGSEGVGASSKQFGVTKPISMAGPSATDLQRTRELEKFLAVSGLYESKDEAAKREEVLH
RLGEIVKSWVKQLTRLRGYTGQMVEDANAIILTFGSYRLGVHGPGADLDTLCIGPSYVTR
EEDFFYTLHDILANVEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLVLPEDLDIS
DVSVLHNVDEPTVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLG
GVNLALLVARVCQFYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKN
PRDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNKICGEIELSRACWKALFEQY
SFFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDT
SRQCAHCAFFMGLQRKQGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRR
QIPFYVVPDGYKRSRLSRPTSQVENCKSFHNEVSGTEHVERIRKRKNNDGVDVRGDAIVK
RQSASPSEDRLARHSSLGTGGLSVEAVSDRQELRNVECNHLSNSGQDELDRTESPEAASN
SSVITSVGSSEDTGSVTVAGCVEESTGGVEMMNNGWFEDSTYGNDSVTLVKNIVASGNEV
FQHELQEQFQPNATLGMVLDSAEKVISEVVQEPVIRRLRLSSTV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggggggctctgaaggggtgggagcatcgtcgaagcaattcggtgtcacaaagcccata
tcaatggctggcccatcggctactgatttgcaaaggactcgtgagttagagaagtttctc
gctgtttcggggctttacgagagcaaggatgaagctgccaagagggaagaggttcttcac
cggcttggagagatagttaaaagttgggtgaagcaactgacccgccttaggggatacact
ggtcaaatggtggaggatgcaaatgctatcattttgacttttggttcttatcggcttggt
gttcatggtcctggggctgacttggacactttatgcattgggccgtcctatgtaacccga
gaggaggattttttctacacattgcatgatatcttagctaacgtggaggaagtcacagaa
ttgcaaccaattccggatgctcatgtcccagttatgaaattcaagtttgatggaatatca
attgacctcctctatgccagtatttctagattggttttacctgaagacttggatatatct
gatgtctctgttctacacaatgttgatgagcctaccgtgcgaagtttgaatggctgtagg
gttgcagatcaaattctaaagcttgttcctaatattgagcactttcgtacaacacttcgc
tgcttgaaattttgggccaaaaggcgaggcatttattctaatgtgactggttttctaggt
ggtgttaacttggcacttcttgtagcccgagtgtgccagttttatccgaatgcagttcca
agtatgcttgtttccagattcttcagggtatatacacagtggcggtggccaactcctgtc
atgttatgtccaatagaggagaatgagcttgggtttcctgtttggcatcctggtaaaaat
ccccgtgacagatcccatcatatgccaatcattactcctgcctatccgtgtatgaattct
agttataatgtttctacgagcacccttcgtgtaatgatggaccagttccaatatggcaac
aagatctgtggggaaatagaattgagtagagcttgttggaaggctctgtttgaacagtac
agtttctttgaaagctataaaaactacttgcaagttgacgtagttgctgctgatgccgat
gacttgcgcagttggaaaggttgggtggaatcacggcttcgccagctgactttgatgatt
gaacgtgacacttttgggaagttgcaatgtcatccctatcatcatgagtttgtggatact
tcaaggcagtgtgcacattgtgctttctttatgggtttgcagaggaaacagggagaggtt
gttcaagaaggtcagcaatttgatatacgagggacagttgaagaatttcggcattctgtt
aatatgtacatgttctggaaaccggggatggagatttatgtatctcatgttcgtagaagg
caaattccattctatgttgttcctgatggttataaacgatctcggctatcaaggccaaca
tcacaagttgagaattgtaaatcatttcataatgaggtttcggggactgaacatgttgag
agaatccgtaagaggaagaacaatgacggtgtggatgtgaggggggatgctatagttaaa
aggcaatctgctagtccttctgaagatagattggcaagacacagcagccttggtactggt
ggtttgtctgttgaagctgtatctgatagacaagagttgagaaatgttgagtgcaatcat
ttgtcaaacagtgggcaagatgagttggatagaacagagtctccagaagctgcttcaaat
tctagtgtgattacatctgttggttcttctgaagatactggatctgtaacagtggcagga
tgtgttgaggaaagcaccgggggtgttgaaatgatgaacaatggctggtttgaggatagc
acttatgggaatgattctgtcacactggtgaaaaatatagtggcaagtggaaatgaagtg
tttcaacatgagctacaggagcagtttcagccgaatgcaacgctagggatggttcttgat
tctgcagaaaaggttatttcagaagttgtgcaagagccggtgataaggagattgagacta
tcatcgacagtgtga
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