Glycine soja (wild soybean): 114417983
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Entry
114417983 CDS
T06057
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114417983
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
114417983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
114417983
NCBI-ProteinID:
XP_028238892
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Position
7:complement(1231167..1235468)
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AA seq
659 aa
AA seq
DB search
MASYRPFPPQSSQIPNPIPGGNHQYNNNQNQNWGAYGDPSTSSFPQIPPNSNYHQNQQHH
VPYAPPNPHHPHYPYPPPPPPPPPEASYQPPPPPPPAPMYYPSNNQYSNQPPPPPPPLSP
PPPPPPVSPPPPPPVTQNNEERHFKEPSTSGRREYEHSNHGIAHKQHKQQPPVPVKKMNN
GPPGRAETDEEKRLRKKREFEKQRQEEKHRQQLKESQNTVLQKTHMLSSGKGHGMIAGSR
MGERRSTPLLGAERVENRLKKPTTFLCKLKFRNELPDPSAQPKLMASKKDKDQYAKYTIT
SLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDKELLRDDEAVTPIKKDGIK
RKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGGRGILDNLNSRERQIR
EIEASFEAAKSDPVHATNKDLYPVEVMPLLPDFDRYDDQFVVAAFDNAPTADSEMHAKMD
KSVRDAFESKAVMKSYVATGSDPANPEKFLAYMVPAPGELSKDIYDENEDVSYSWIREYH
WDVRGDDADDPATFLVAFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQCPVPARVTVR
RRSSVAAIERKDSGVYTSSKGNSSKRGGLEMDDGLEDQHRGAPHQDNYQSSGAEDYMSD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttacaggcccttccctcctcaatcgagtcaaattccaaaccctatcccaggt
gggaatcatcagtataataataatcaaaatcaaaattggggtgcttatggagatccctct
acttcttcattcccccaaatccctccaaattccaattatcatcaaaatcaacaacatcat
gttccatatgcacctccaaatccccaccaccctcactatccatatccaccaccacctccg
ccgccgccaccggaggcttcataccagcctccaccaccaccaccaccagctcctatgtat
tatccctctaataatcagtatagcaaccagccacctccaccgccgccgcccttgtcccca
ccaccaccacctcccccggtttcgccccctcctcctcccccggtaactcagaacaacgaa
gagcggcacttcaaggagccttccacgtccggccggcgtgaatacgagcattccaatcac
ggcattgctcacaagcagcacaagcagcagcctcctgtgccagtgaagaagatgaacaac
gggcctcctggcagggctgagaccgatgaagagaagaggttgaggaaaaagagggagttt
gagaagcagaggcaggaggaaaagcataggcagcagctcaaggagtcccagaacactgtt
ctgcagaagactcacatgttgtcctctgggaaggggcacggcatgattgcagggtctcga
atgggagaaaggagatctactcccttgttgggtgctgagagggttgaaaataggttgaag
aagcccacaacgtttttgtgtaagctcaaatttcgaaatgaacttccagatccaagtgct
caacctaagcttatggcctccaaaaaagataaagatcaatatgcaaaatatacaatcaca
tctctggagaaaatgtacaaacccaagctttttgtggagccagatctagggatacctcta
gatcttcttgatctcagtgtttacaatcctcccagtgtcagaccacctcttgctccagaa
gataaagaattgttgcgagatgatgaagctgttactcctattaaaaaagatggcataaaa
agaaaagagaggcctactgataaaggtgttgcatggcttgtcaaaacacaatatatatct
cctctaagcatggagtcaacaaagcagtctttaactgagaaacaagctaaggagctgaga
gagatgaaaggaggtcgtggcattttggacaatctcaacagtagggaaagacaaatcagg
gaaattgaagcatcatttgaagcagctaagtctgatcctgttcatgcaaccaacaaagat
ttgtatcctgttgaggttatgccgttgctgcctgattttgataggtatgatgatcagttt
gttgttgctgcatttgataatgctccaacagctgattcagaaatgcatgctaagatggac
aaatctgttcgtgatgcctttgaatcaaaggcagttatgaaaagttacgttgcaacgggt
tctgatcctgctaaccctgagaagtttttggcttatatggtcccagcaccaggagagctg
tcaaaggatatatatgatgaaaatgaagatgtctcgtactcttggatacgcgagtatcat
tgggatgttcggggtgatgatgcagatgatcccgcaacattcttagttgcatttgatgag
tccgaagcacgctacttgcctcttccaactaaacttgttttaagaaaaaagagggcaaaa
gagggaagatcaggtgatgaggttgagcaatgtccagtacctgcaagagtgactgtaagg
cgaaggtctagtgttgctgcaattgagcggaaggattctggggtatatacaagttcaaag
ggaaattcctcgaaaagaggtggcttagaaatggatgatggtctcgaagaccaacataga
ggtgcaccacaccaggacaactatcagtctagtggagcagaagattacatgtctgattga
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