Glycine soja (wild soybean): 114418034
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Entry
114418034 CDS
T06057
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114418034
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114418034
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
114418034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
Prok-RING_4
Prok-RING_1
Pox_A14
zf-RING-like
zf-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
114418034
NCBI-ProteinID:
XP_028238972
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All DBs
Position
1:48698769..48700524
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AA seq
426 aa
AA seq
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MNQLCGVILLVHSVLCFHARAQTAAPSGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAK
FCQRCASSPVGDTENQLPFVRSRSRFSGIDKNVIESLPFFRFSSLKGSKEGLECAVCLSK
FEDVEILRLLPKCKHAFHIDCIDHWLEKHSSCPICRHRVNPEDHTTFTYSNSLRRLANQS
EVGEESNIEIFVQREEEHHGSSRFSFGSSFRKTGKYVKEEEFLIEKGAEDSDGNQKGYHK
HNHRITISDVVFKHRWSNVSSSDLMFLNSEMLNDASSNRFSNLESNADMMSSTRGVVENE
QIMNIKEEMERKISFESKVGVLNNIKSVSDKHLLFTSDSAGKSTHAPKYANPGEKRSMSE
ITAVSRFGDLGMKMRVFKDSSSLQNNLKEERMRQIWFPIARRTAQWFVNRERRSQQSQNK
QQPLDV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaactttgtggtgttatccttttggttcactcagtcttgtgtttccatgctaga
gcacagactgctgcaccttcaggagatgctgtctccaatttccaaccaagccttgctgtt
gtcataggaatccttggtgtcatgttcttactcacattctttcttctcatgtatgcaaaa
ttctgtcaacgctgcgcttcttcgcccgttggagacacagaaaatcaactcccttttgtt
agatcaagatctagattctcaggaattgacaagaatgtcatagaatcactccccttcttc
agattctcttcactcaaagggtcaaaggaagggctggagtgtgcagtgtgcttatcaaag
tttgaagatgttgaaattctcagacttctaccaaagtgcaagcatgcttttcatattgat
tgcatagaccactggcttgaaaaacactctagctgtcctatttgcaggcacagagtcaac
cctgaggaccacacaaccttcacatattcaaacagtttaaggaggctagcaaaccagtca
gaggtaggtgaagaatctaacatagagatctttgtccagagagaggaagagcatcatggt
tcatcaagattcagttttggaagcagctttcggaaaacgggaaagtacgtcaaggaagaa
gaattcctcattgaaaaaggagcagaagatagtgatggtaatcagaagggatatcacaaa
cacaaccacaggattactatatctgatgttgtgttcaagcacaggtggagcaacgtgagt
tcttcagaccttatgtttctgaattcggagatgctgaacgatgcatcaagcaacagattc
agcaacttggaatcaaatgctgacatgatgtctagtacaagaggggtggtggaaaatgag
caaattatgaatattaaggaggagatggagaggaagatttcatttgagagcaaagttggt
gtactgaacaacatcaaatcagtttcagataagcatcttctttttacatcagattctgca
gggaaatcaactcatgcaccaaagtatgcgaatcccggtgagaaaaggtcaatgtcagaa
atcactgctgtctctagatttggagatttaggcatgaaaatgagggtcttcaaggattct
tcttcccttcaaaacaaccttaaagaggaaagaatgaggcagatttggtttccaattgca
agaagaacagctcaatggtttgtgaatagagaaagaaggtctcaacaatctcagaataaa
caacagccattagatgtataa
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