Glycine soja (wild soybean): 114418190
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Entry
114418190 CDS
T06057
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114418190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114418190
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114418190
mRNA degradation factors
5'-3' decay
Lsm complex
114418190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
114418190
NCBI-ProteinID:
XP_028239216
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Position
7:3409450..3412429
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AA seq
128 aa
AA seq
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MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggccctgaggatatttacctttctacttcacttgccagctatcttgac
aagaaacttcttgtattgctgagagatggtagaaagctcatgggaacacttcgctctttt
gatcaatttgctaatgcagttcttgagggtgcttgtgagagggttattgttggtgatcta
tactgtgacatccctttaggtctttatgtgatccggggggaaaatgttgttctaattggt
gagctggacttggagagggaggaacttcccgaacatatgacacgtgtttctaccgcagaa
atcaagagggcacagaaagcagaaagggaagcttcagatctgaaagggactatgaggaaa
agaatggaattccttgactttgactaa
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