Glycine soja (wild soybean): 114418333
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Entry
114418333 CDS
T06057
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1-like isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
114418333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114418333
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
114418333
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
Pkinase
Beta-prop_TEP1_C
EIF3I
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
PK_Tyr_Ser-Thr
Beta-prop_IFT140_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
114418333
NCBI-ProteinID:
XP_028239426
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Position
7:5231816..5239032
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AA seq
1035 aa
AA seq
DB search
MATANGGTGTEEHKRKSNDLFLKQGGHQIMPRSPRLCTPIRKEWPEESLPNDNVIGLNSY
VTSLAGSGPPSSSFCSTIDSEHIVEELPVRNYENQNINLVNHPHNSRQARNQLTIESKYN
ILSREVVPKVEEQMPLRLSKGLKGIDSEFWGLKSLAGKSVNHDSLKVSEDISSMGKAIIS
NNAHLISSITQSTSSAYNYPQLIVKQTRKGKGVICEDLNKSFSIGGALKSQEDEKLGFAA
KFQSETLVRSNVDENNKPLLEGTFMSGCNGLNLRDWLKFKGHKMNKSGRIHIFKQVLELV
DFEHSQGLVLLDFRPSCFTLLPSSKIKYIGSFGQQELDYEVMTCNVTRKRPLEQNTCACQ
SLSTKQKKLCEETGSSRQQHHCTSIHGCQTTVNQTDSDTNRPVESRSKESLCQNNSTCTE
EKQFMSVLNKLEEKWYCSPEVLNDGVCTFSSNIYSLGVLLFELLCNIESWETHSTAMLDL
CHRILPPKFLAENPKEAGFCLWLLHPEPSSRPNARMILDSEVIRESKESNSVDDVGISDD
EAETEQLLDFLILFKEEKKKREAKLKEELNLLNEDMKEVERSYSFVTDSVFPLVQINNPE
LRGDSLHFQDSSGSDISRSIRRLFGDEERYMSNINQLENSYFSSRFRVLPKEASSVSIND
KNVMESRWRLPQVENVNKESRRIQSSVGCLGSFFEGLCKFARYSKFEECGRLRNRDLLSS
ANVMCALSFDRDEDHIAAGGVSKKIKIFDLNAISSNSVDIQYPVVEMSNKSKLSCVCWNP
YIKNHLASTDYDGVVQMWDADTGQPLSQYMEHQKRAWSVHFSLSDPKMFASGSDDCSVKL
WNISERNSLGTIWNPANICCVQFSAYSTNHLFFGSADYKVYGYDLRHTRIPWCTLTGHGK
TVSYVKFIDAEAVVSASTDNSLKLWDLKKISSSGLSSDACAVTFKGHSNEKNFVGLSVLD
GYIACGSESNEVYCYHKSLPVPIATHKFESVDPISGHLNSGDNNGQFVSSVCWRKKSNML
VAANSVGIVKLLQMV
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaaatggtgggactgggactgaggagcacaagaggaaatctaatgatctt
tttcttaagcaagggggacaccaaatcatgccaagatcacctagattgtgcacccctatt
cggaaggaatggccggaggagagtttgccaaatgacaatgtgattggtttgaatagctat
gttacttccttagctggatctggacctcctagttctagtttttgttccacaattgattct
gaacacattgttgaagagttgcctgttaggaattatgagaaccagaatataaacttagtt
aaccatccacataattcaagacaggcaaggaatcaattgactattgagtctaagtataat
atcttgagtagagaagttgtacccaaggttgaggaacagatgccactcaggttaagcaaa
ggacttaagggaattgattctgaattttggggcctgaagtctctggctggcaaaagtgta
aatcatgactcactgaaagtctcagaagatataagcagtatgggcaaggctatcatctcg
aacaatgcacatcttattagcagtataactcagagtacttcatctgcatataattatcct
caattgattgtaaagcaaacaaggaagggaaaaggggttatttgtgaagatttaaacaaa
agcttcagtattggaggagcacttaagagtcaagaggatgagaaacttggttttgccgct
aagtttcaatccgagacactggtgagatcaaatgttgatgagaataataagcctttattg
gaaggaactttcatgtctggttgcaatggactcaacttaagagactggctgaagttcaaa
ggacataaaatgaataaatcaggaaggattcatatatttaagcaagtattggaattggtt
gattttgaacactctcaaggactcgtcttgctagactttcgaccatcttgtttcacttta
ttgccttcaagtaaaattaagtatattggttcatttggccaacaagagttagattatgaa
gtcatgacatgtaatgtgactaggaaaaggcctttggaacagaatacctgtgcttgccag
agtttgagtacaaagcagaaaaagctctgtgaggagacaggatcttctaggcagcagcat
cactgtaccagtattcatggctgccagacgacagtaaatcaaactgactccgacacaaac
agacctgtggaatcaaggagtaaagaaagtctatgccaaaataattctacttgtactgaa
gaaaagcagtttatgtctgtgcttaataagttagaagagaagtggtattgtagtcctgaa
gtgctcaacgatggagtttgcacattttcatcaaatatttatagccttggagttctcctt
tttgagttgctgtgcaatattgagtcatgggagacacattcaactgcgatgttggatttg
tgtcatagaatcttaccacctaaatttctagcagaaaatccaaaggaagctggtttttgt
ctttggcttttgcatcctgaaccttcttctcgccccaatgccagaatgattttagactct
gaagttattcgtgaatcaaaggaatcaaattctgtagatgatgttggaatatctgatgat
gaggctgaaacagagcaattactagattttctaattttattcaaagaagaaaagaaaaaa
cgggaagcgaagttgaaagaagagctaaatttattgaatgaagatatgaaggaggtagaa
agaagttattcatttgtgacagattcagtatttcctttggtgcaaataaacaatcctgaa
ttgagaggagacagtttacattttcaagattcttccggttcagacattagtagatccatt
cgaaggttgtttggtgatgaagaaagatatatgagtaacataaatcagctagagaattct
tacttttcctcgagatttcgagtcctgccaaaagaagcttcatctgtttcaatcaatgat
aaaaatgtgatggaaagtagatggaggttgcctcaagtagagaatgttaataaggagtct
agaagaattcagagttctgttggttgtctaggatccttctttgaaggtttatgcaagttt
gctcgttacagcaagtttgaagagtgtggcagattaaggaatagagatttgcttagttct
gccaatgtaatgtgtgctttaagttttgaccgtgatgaggatcacattgcagcaggagga
gtttcaaagaaaatcaagattttcgacctcaatgctatttcaagcaattctgttgacatc
cagtacccagtagttgagatgtcaaataaatcaaagcttagttgtgtgtgctggaaccct
tacataaaaaatcatctggcatctactgactatgatggtgtggttcagatgtgggatgca
gacactggtcagccattgtctcaatacatggagcaccaaaagagagcttggtctgttcac
ttttctttgtcagacccaaaaatgtttgctagtggaagtgatgactgctctgtcaaactg
tggaatatcagtgagagaaattctctgggaaccatctggaaccctgccaatatatgctgt
gttcagttctctgcttactcaacaaatcatctattttttggatctgctgattacaaggtt
tatggctatgatcttcgtcacactagaatcccttggtgcacattaactggtcatggcaaa
actgttagctatgtaaaatttatagatgctgaagcagttgtctctgcttccactgacaac
tctttgaagctttgggacctgaagaaaatcagctcttctggtttgtcatctgatgcttgt
gccgtgacctttaaaggtcatagtaatgaaaagaatttcgtgggattatcagttttggat
ggatacattgcatgtggttcagaatctaatgaggtgtactgttatcacaaatcactgccg
gtgccaattgctactcataaatttgagtcagttgatcctatttctggccatctaaatagt
ggtgataataatggacagtttgtttccagtgtttgctggagaaagaaatctaacatgctt
gttgctgccaactcagttggaattgtgaaactgttgcagatggtctga
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