Glycine soja (wild soybean): 114418597
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Entry
114418597 CDS
T06057
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114418597
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114418597
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114418597
03036 Chromosome and associated proteins [BR:
gsj03036
]
114418597
Protein phosphatases and associated proteins [BR:
gsj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
114418597
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
114418597
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
114418597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
HEAT_EF3_N
Htt_N-HEAT_1
PDS5
Adaptin_N
CLASP_N
Cnd1
TAF6_C
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
114418597
NCBI-ProteinID:
XP_028239828
LinkDB
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Position
7:complement(8540757..8549578)
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AA seq
587 aa
AA seq
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MAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEDRTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVDHANVLLPPLETLCTVEETCVRDKSVESLCRIGAQMREQ
DLVEHFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPESVKTELRAIYGQLCQDDMPMVR
RSAATNLGKFAATVEAPHLKSDIMSVFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDPTRSELVPAYVRLLRDNEAEVRIAA
AGKVTKFSRILNPDLAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNIKRLAEEFGPDWAMQHIIPQV
LDMVTDPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVINASKDRVPNIKFNVAKVLQS
LIPIVDQSVVESTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtggaccagcctctgtatccgattgccgttttgatcgacgagttgaagaac
gaggacattcagctgcgcctgaactcgatccggaggctctccacgatcgcgcgcgcgctc
ggcgaggaccgcacgcggaaggagctgattccgttcctcagcgagaacaacgacgatgac
gacgaagtgcttctcgcaatggccgaggaattaggcgtcttcattccctacgtcggaggc
gtcgaccacgccaacgtgcttcttcctcccttggagactctctgcaccgttgaggaaacc
tgcgtcagagacaaatcggtggagtcgctgtgcagaattggagcacagatgagggagcaa
gacttggttgagcacttcattcctttagttaagaggctggctgctggtgagtggttcacg
gcacgggtttcgtcgtgtggtttgttccatattgcttaccccagtgcaccagagtcggtg
aagactgaactgagagccatatatggtcagctgtgtcaagatgatatgcccatggttagg
agatccgctgccacaaacctgggaaagtttgccgcaactgttgaagctcctcacttgaaa
tctgacatcatgtctgtgtttgaggatctcacacaggatgatcaagattctgttcggcta
cttgctgttgagggttgtgcagctctgggaaaattgttggaacctcaagattgtgtggca
catattcttcctgtcatagtcaatttttctcaggataagtcatggcgtgttcgttacatg
gttgctaatcaactatatgagctatgtgaagctgttggtcctgaccccaccaggtcagaa
ttggtccctgcatatgttcgtctgctgcgtgataatgaggctgaagtacgtattgctgct
gctgggaaagtaactaagttttcccgcattttaaatcctgaccttgccattcagcatatt
ctaccatgtgtgaaggagttatcaacagattcatctcaacatgttcgctctgcactggct
tccgttataatgggtatggcaccagtgttagggaaggatgctacaattgagcaacttctg
cctattttcctttctcttttgaaagacgagtttcctgatgtcaggctaaatattatcagc
aagcttgatcaagtgaaccaggttattggtattgatttgttatctcagtctctgttgcca
gccatagtagaactagctgaggatcggcactggagagttcgacttgcaatcatagaatac
atacccttattggcaagccagttgggtgttggtttttttgatgataagcttggagctctt
tgcatgcaatggctaaaggacaaggtatactcaatccgtgatgcagccgctaataacatc
aaacgcttggcagaagaatttggaccggattgggcaatgcagcacattattccccaggtt
ttggacatggttactgatccacattatctgtatcggatgacaattttacaagcaatttct
ctactagctcctgttctgggctcggagattacttcttcaaaactgctccctctggtcatt
aatgcatcaaaggatagggtacccaatatcaaattcaatgtagctaaagtgttgcagtct
ctcatcccaattgttgatcagtctgttgttgagagtaccatccgtccctgtctggttgag
ctcagtgaggatccagatgttgatgttaggtttttcgcctcacaagcactacaatctagt
gatcaagtcaagatgtctagctag
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