Glycine soja (wild soybean): 114419287
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Entry
114419287 CDS
T06057
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
gsj04141
Protein processing in endoplasmic reticulum
gsj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114419287
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114419287
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114419287
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114419287
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114419287
03009 Ribosome biogenesis [BR:
gsj03009
]
114419287
03110 Chaperones and folding catalysts [BR:
gsj03110
]
114419287
04131 Membrane trafficking [BR:
gsj04131
]
114419287
03051 Proteasome [BR:
gsj03051
]
114419287
03029 Mitochondrial biogenesis [BR:
gsj03029
]
114419287
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114419287
Protein phosphatases and associated proteins [BR:
gsj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
114419287
Spliceosome [BR:
gsj03041
]
Complex B
Other components
Prp19 complex
114419287
Complex C
Prp19-CDC5 complex
114419287
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
114419287
Chaperones and folding catalysts [BR:
gsj03110
]
Heat shock proteins
HSP70 / DNAK
114419287
Membrane trafficking [BR:
gsj04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
114419287
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
114419287
Proteasome [BR:
gsj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
114419287
Mitochondrial biogenesis [BR:
gsj03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
114419287
Exosome [BR:
gsj04147
]
Exosomal proteins
Proteins found in most exosomes
114419287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DUF4843
DUF357
Motif
Other DBs
NCBI-GeneID:
114419287
NCBI-ProteinID:
XP_028240733
LinkDB
All DBs
Position
7:31414875..31419604
Genome browser
AA seq
620 aa
AA seq
DB search
MAREYEGCAVGIDLGTTYSCVAVWLEQHCRVEIIHNDQGNNTTPSCVAFTDHQRLIGEAA
KNQAATNPENTVFDAKRLIGRKFSDPVIQKDKMLWPFKIVAGINDKPMISLNYKGQEKHL
LAEEVSSMVLTKMREIAEAYLETPVKNAVVTVPAYFNDSQRKATIDAGSIAGLNVMRIIN
EPTAAAIAYGLDKRTNCVGERSIFIFDLGGGTFDVSLLIIKDKVFRVKATAGNTHLGGED
FDNRMVNYFVQEFKRKNKVDISGNARALRRLRSACERAKRILSYAVTTNIEVDALFQGID
FCSSITRAKFEEINMELFEECMETVDRCLSDANMDKSSVHDVVLVGGSSRIPKVQELLQD
FFNGKILCKSINPDEAVAYGAAVQAALLSKGIVNVPDLVLLDITPLSLGISLKGDLMSVV
IPRNTTIPVKTTETYSTAVDNQSAVLIEVYEGERTRASDNNLLGFFRLSGIPPVPRNHLV
YICFAIDENGILSVSAEEKSTGNKNEITITNDKERLSTKEIKRMIQEAEYYQAEDKKFLR
KAKAMNDLDCYVYKIKNALKQKDISSKLCSKEKEDVSSAITRATDLLEGNNQQDDIAVFE
DNLKELESIIERMKAMGKIV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggccagagaatacgagggatgtgcagtgggaattgaccttggcacaacttactcgtgt
gttgcagtgtggctggagcagcactgtcgagtggagatcatccacaatgaccaaggcaac
aataccaccccttcttgtgttgctttcacagaccatcaaaggttgattggtgaagctgct
aaaaaccaggctgctaccaacccagagaacactgtgtttgatgctaagaggttgattggt
aggaaatttagtgaccctgttattcaaaaagataaaatgttgtggccgttcaagattgtt
gctggtattaatgacaaacccatgatttcccttaattacaagggccaggagaaacacctt
ttagccgaggaagtatcatctatggtcctcacaaagatgcgggagattgcagaggcatat
ttggaaacacctgtaaaaaatgcagtggttactgtgcctgcttatttcaatgactcacaa
cgtaaagccaccatagatgctggttctattgcaggcctgaatgttatgcggataatcaat
gaacctactgctgcagctattgcatatgggcttgacaagagaactaattgtgttggagag
cgaagcatcttcatctttgaccttggtggtggtacttttgacgtgtctctcctcataatt
aaggataaggtcttccgagttaaggccactgcaggaaacactcaccttggaggggaggac
tttgacaacagaatggtgaactactttgtacaagagttcaagaggaagaacaaagttgac
attagtgggaatgcaagagccctaaggaggttgagaagtgcatgcgagagggcaaaaagg
atactctcgtatgcagtgactaccaacattgaggtagatgctttattccagggcattgac
ttttgctcctcaatcacccgtgcaaaatttgaggaaatcaatatggagctctttgaagag
tgtatggaaacagtagataggtgtctttctgatgccaacatggacaagagcagtgtacat
gatgttgtccttgttggtggttcttctaggattccaaaagtgcaggagctattgcaggac
ttcttcaatgggaagattctgtgcaagagcatcaaccctgacgaggctgttgcttatggt
gcagctgtgcaggctgctttgttgagtaaaggcattgtgaatgttccagacttggtcctg
ttggatattacacctctgtctcttggtatatcgctaaaaggagatctcatgagtgtggtg
attcctagaaatactaccattcctgtaaagacgacagaaacatactctacagctgtagat
aaccaatctgctgtcctgattgaggtttatgagggtgagagaacaagagccagtgataac
aatttgctgggtttttttaggctttctggcattcctcctgttcctcgtaaccatcttgtg
tatatttgctttgccatagatgaaaatggtattctatctgtttctgccgaggaaaaaagc
actggcaataagaatgagattaccataaccaatgacaaagaaaggttatcaaccaaagaa
attaaaagaatgattcaagaagctgagtattaccaggctgaagataagaaattccttagg
aaggccaaagcaatgaatgatttggattgttacgtttacaagatcaagaatgctttaaag
caaaaggatatcagctcaaagctttgctcaaaagaaaaggaggatgttagttctgcaatt
acaagagctacagatttgcttgaaggtaataaccagcaggatgacatagctgtgtttgag
gataatctgaaagagcttgagagcatcattgaacgcatgaaggccatgggcaaaattgtt
tag
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