Glycine soja (wild soybean): 114419386
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Entry
114419386 CDS
T06057
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114419386
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114419386
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_1
PPR_3
Suf
ARM_TT21_2nd
DUF4522
Motif
Other DBs
NCBI-GeneID:
114419386
NCBI-ProteinID:
XP_028240837
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Position
7:36443246..36447718
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AA seq
763 aa
AA seq
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MVGRFVTRHDLLLPLPLTTLSPNPNPPTMRSSSTLLHSLALSLSHLHHPFLSAPPLFPRL
AVTVPEREVLRSAEAEARGLRGPEVEVGELSAVPEEWRRARVAWLCKELPAHKAGTLVRI
LNAQKKWMWQEDATYVLVHCLRVRENETAFKVYKWMMQRNWYRFDFALATKLADYMGKEG
KFSKCREVFDDIINQGRVPSESTFHILVVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRL
SIHNSVFKALVSNPGILSKNYLKQAEFIYHHLVTTGLDVHKEIYGGLIWLHSYQDSIDKE
RIAELREAMLRAGFEEDREVLLSILRACAREGEVEEAEKSWVKLLEFENDPPALAFVYKM
EVYSKVGMPMKSLDIFREMQSKLGRTDVAAYNQIIEILCKAQESELAESIMADFVKSDLK
PLTPSYVYLLSMYFNLELHDKLEESFYKCLEKCRPNCAIYSIYLNSLVKIGNIDKAEDIF
NQMNHDATIGVNARSCNIILSGYLSSGKHLKAEKVYDFMCLKKYEIESSLMEQLDYILSL
KRKVVKRPISMKLSKEQREIMIGLLLGGLRIDSDDRRRNHIIRFDFDGNSGSHYVLKSHI
YHLFFEWLHPTCKPGDNSENIPDKFCTIASSHFGFYADQFWSKGEPSIPKLVHRWLSPCV
LAYWYMYGGHRNSSGDILLKVKGSREGVENIVRKFKGMSMDCKVKRKGRVFWIGILGSNS
TWFWKLVEPYVIENKDFAEAGDETKEQDAKETEDINFNSDSDE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggtggggaggtttgtgacacgtcacgaccttcttcttccacttccactaactactctt
tccccaaaccctaatcctccaaccatgcgctcttcctccaccctcctccactctctcgct
ctctctctctcccatctccaccaccccttcctctccgctcctccgctcttcccgcgcctc
gccgtgacggtgccggaaagggaggttctcaggtcggcggaggcggaggcgagggggctg
cgggggccggaggtggaggtgggggagctgagcgcggttccggaagagtggcggagggcg
agggtggcgtggctctgcaaggagctgcccgcgcacaaggcggggactctggtgaggata
ctgaacgcgcagaagaagtggatgtggcaggaggacgccacctacgtccttgtccactgc
ctccgcgttcgcgaaaacgaaaccgcattcaaggtatacaagtggatgatgcaacgtaat
tggtatcgatttgattttgctcttgctaccaagctagcagattacatgggtaaagaggga
aagttttcaaagtgccgtgaggtatttgatgatattattaatcaaggccgtgttcctagt
gagtcaaccttccatatattagttgttgcttatctcagtgctcctgttcaaggttgtttg
gatgaagcatgcagcatttacaatcggatgattcagttgggtggttaccaaccccgtctt
agcatacataattccgtcttcaaagctcttgtaagcaatccggggatcttgtcaaagaat
taccttaagcaagctgagtttatatatcatcatttggttacaactggacttgatgtgcat
aaagaaatttatgggggcctaatttggctgcatagctatcaggattccatagataaagaa
aggatagcagaattgagggaagcaatgctccgtgctggatttgaggaggatagagaggtg
ctattatcaatcttgagggcttgtgcaagggaaggggaggtggaggaagcagaaaagagt
tgggtcaaacttctcgagtttgaaaatgaccccccagctctggcttttgtgtataaaatg
gaagtctactcaaaggttggcatgccgatgaagtcattggatatattcagggaaatgcag
tcaaaactaggtagaacagatgttgcagcatataatcaaataatagagatactatgcaaa
gcacaagaatcagaattggccgaatcaatcatggcagattttgtcaagagtgatctgaag
ccccttacgccatcgtatgtttatttactaagcatgtacttcaatttggaattacatgac
aaactggaagagtcattctacaagtgcttggagaaatgtcgtcctaattgtgctatatac
agtatatatctgaattctttggtgaaaataggtaatattgacaaggccgaggatatattt
aaccaaatgaatcatgatgcgaccatcggtgttaatgctcgatcatgtaacatcatctta
agtggatacctgtcttcaggaaaacacttaaaggcagagaaggtctatgactttatgtgt
ctaaaaaagtatgaaattgaatcctcattaatggaacagcttgactatatcctgagcttg
aaaaggaaagttgttaaaagaccaataagcatgaagttaagcaaagagcaaagagaaatc
atgattgggttgcttttaggtggtttgcgaattgattctgatgaccgaaggaggaatcac
attattcgttttgattttgatggcaattccggcagccattatgtcctgaagagtcatata
tatcacctgttttttgagtggctgcatcctacttgtaagccaggtgacaatagtgaaaac
ataccggataagttttgcaccattgcaagctctcattttggcttttatgcagatcagttt
tggtcaaaaggtgaacctagtattccaaaactagtccataggtggttgtcaccatgtgtt
cttgcatactggtacatgtatggtggccatcgaaattcatcaggggatattttgctgaaa
gtaaagggaagtcgtgagggtgttgagaacattgtcagaaaatttaaaggcatgtccatg
gattgtaaagtcaagaggaaaggaagggttttttggattggtattctgggaagcaattca
acttggttctggaaattggttgagccatatgtcatagaaaataaagattttgctgaagca
ggtgatgagacaaaggagcaggatgcaaaggaaactgaagatattaacttcaatagtgat
tcagatgaatga
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