Glycine soja (wild soybean): 114419482
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Entry
114419482 CDS
T06057
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114419482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114419482
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114419482
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
DUF7885
F-box-like
Methylase_S
Motif
Other DBs
NCBI-GeneID:
114419482
NCBI-ProteinID:
XP_028240956
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All DBs
Position
7:complement(37966242..37971362)
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AA seq
578 aa
AA seq
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MECRRKKENQKSNSTFPDEVLERILGMLKSRKDKSTVSLVCKEWFNAERWSRRSVFIGNC
YSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPANWGADIHSWLVVFAEKYPWLEELRLK
RMTVTDESLEFLALKFPNFKALSLLSCDGFSTDGLASIATNCKNLTELDIQENGIEDKSG
NWLSCFPDSFTSLEVLNFANLHNDVNFDALEKLVSRCKSLKTLKVNKSVTLEQLQRLIVH
VPQLGELGTGSFSQELTSQQCSDLESALKNCKNLHTLSGLWVATAQYLPVLYSACTNLTF
LNFSYAPLDSDGLTKLLVHCPKLQRLWVVDTVEDKGLEAVGSHCPLLEELRVFPADPFDE
GIVHGVTESGFIAVSQGCPRLHYVLYFCRQMTNAAVATVVQNCPDFTHFRLCIMHPGQLD
YLTQESMDEAFGAVVKTCTKLQRLAVSGYLTDLTFEYIGKYAKNLETLSVAFAGSSDWGM
RCVLDGCPKLRKLEVRDCPFGNGALLSGLGKYESMRSLWMSDCNLTMNGVRLLAQEMPRL
NVEVIKEESYETHQAKKVYVYRSVAGPRRDAPPFVLTL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtaggagaaagaaggagaatcaaaaatcaaactccactttccctgatgaggtg
ttggagcgaattcttgggatgttaaagtcccgcaaggacaaaagcacggtttctttggtt
tgcaaagagtggttcaacgcagagagatggtcaaggaggagtgtgttcataggtaactgc
tactctgtgtctcctgaaatcttaactcgcaggtttccaaacattagaagtgttacactg
aaagggaagcctcgtttctctgacttcaacttggttcctgccaattggggtgctgatatt
cattcttggcttgtggtgtttgctgagaagtacccttggcttgaggagttgaggctcaag
agaatgactgttactgatgagagcttggagtttctggctctcaaattccccaatttcaaa
gccctttcccttctcagttgtgatggattcagcactgatgggctggcttcaattgccact
aattgcaagaatttgactgaacttgacatacaagagaatggtattgaggataagagtggc
aattggttgagttgtttccctgacagcttcacatcattggaagtattgaactttgccaat
ctgcacaacgatgtaaattttgatgcactcgagaaacttgtcagtaggtgcaaatcatta
aagactttgaaggttaacaaaagtgtgacactagaacagttacaaaggcttattgttcat
gttcctcagttaggtgaacttggtactggctccttttcacaagagttgacatcacagcag
tgctcagatcttgaaagtgcattaaaaaattgtaaaaatcttcacaccctttcagggtta
tgggtagctacagcacaatatctcccagttctgtactctgcatgcacgaatctaactttc
ttgaattttagttatgcacctcttgacagtgatggccttactaagcttcttgttcactgt
cctaagcttcagcgcctctgggttgtggacactgttgaagacaagggactggaagctgtt
ggatcacactgtccattacttgaggagctgcgtgtttttcctgcagatccctttgatgag
ggcattgttcatggggttactgaatcagggtttattgcagtctctcaaggatgcccgaga
cttcactatgttctctacttttgccgtcaaatgaccaatgctgctgttgctactgttgtc
caaaactgtcctgactttactcatttccgactctgcatcatgcaccctggtcagctagat
tacttgacccaagaatcaatggatgaggcctttggagctgttgttaagacttgcactaaa
ctccagaggcttgcagtatcaggttatctgactgacctaacttttgagtatataggcaag
tatgcaaaaaacttggaaactctttccgtggcttttgctggaagcagtgattggggcatg
cgctgtgtgctggacggctgtccaaagctgagaaaactagaggtaagggactgtccattt
ggcaacggagctcttctgtcaggcttggggaagtatgagtcaatgagatcactgtggatg
tcagactgcaatttgacaatgaatggtgttagattgttggcccaagaaatgcctaggttg
aatgttgaagtcataaaggaagaaagctatgagactcatcaggctaaaaaagtttatgtt
tatcgatctgttgctgggccaagaagggatgcccctccttttgttctcactctctga
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