KEGG   Glycine soja (wild soybean): 114419503
Entry
114419503         CDS       T06057                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gsj04812]
    114419503
Cytoskeleton proteins [BR:gsj04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     114419503
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C eIF2A Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_RFWD3 VPS8_N Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR75_2nd FIMAH
Other DBs
NCBI-GeneID: 114419503
NCBI-ProteinID: XP_028240983
LinkDB
Position
7:complement(38164786..38174522)
AA seq 776 aa
MAKTGYKLQEFAAHSGNVNCLKIGRKANHLFITGGDDCNVNLWMIGKPTSLMSLCGHTSS
VESVTFDSAEVLVLSGASSGVIKLWDLEEAKMVRTLTGHKSNCTAVEFHPFGEFFASGSS
DTNLNIWDIRKKGCIQTYKGHSQGISTIKFSPDGRWVVSGGFDNVVKVWDLTGGKLLHDF
KFHKGHIRSLDFHPLEFLMATGSADRTVKFWDLETFELIGSTRHEVLGVRSIAFHPDGRT
LFAGLEDSLKVYSWEPVICHDVVDMGWTTLGDLCIHDEKLLGCSFYSNSVGVWVSDISLI
EPYSGGLETEKKESTEQELGLQGRQMEKVEASVGLTFGLCSMSPDNDSKEIKNIYIDSSG
GNPDTLLRSRSYNSPKVDLPEESKEMLNWSPATRAREKQNEALRKSYIVPNVVHRDILND
LDSGTVCDTISKSDSAKNPTFQMKLGSQNEVRESVEDKHPIKSVTEKLEKTLTPDRFSDQ
EKCNQSSPYSKEMSPVKYVNGVAVLQGRTRSLVERFERRERTPINEDQANATPTTIFENK
EKKFKDQTNASPITTPTSEKGERILVNEDQNNTSAISNTTSETDTSANFLKVEPQVFGRD
SNSANDGEIIEGLMQTHDVTLSNLRSRLTKLQVVRHFWEQNDTKSAISALRKLPDLSVQA
DVISVLVEKMEILTLDLFSCLLPVLTGLLDSNIERHVKVSLDMLLKLVAVFGPTVRSTIS
APPSVGVDLHAEQRRECSNQCFMQLQKIRLILPILIRRGGLLAKSAQELNLVLQQP
NT seq 2331 nt   +upstreamnt  +downstreamnt
atggcaaagacaggatacaaactacaggaatttgcagctcattcaggaaatgtaaactgt
ttaaaaattggaaggaaggcgaaccaccttttcattacaggaggggatgattgcaatgtc
aatctatggatgattgggaaaccaacctctctaatgagtttgtgtggtcatactagttca
gtagaatcagtgacttttgactctgcagaagtgttggttctttctggagcatcgtcaggg
gtaataaagctttgggatttggaagaagcaaagatggttcgcactcttaccggacacaaa
tctaattgcactgctgttgagtttcatccatttggtgagttttttgcatctggctcctcg
gacactaatctaaatatttgggatatccgaaaaaaaggatgcattcaaacatacaagggt
catagccagggcatcagtactatcaaattcagtccagatggccgttgggttgtttctggt
ggatttgataatgttgtgaaggtctgggatctaacaggtggaaagctcttgcatgacttt
aagttccacaaaggacacattaggtccctagattttcatcctcttgagtttcttatggct
acaggttcagcagacagaacagtgaaattttgggatttagaaacctttgaactgattgga
tctaccagacatgaggtattgggggtacgctcaatagcttttcatcctgatggacgaact
ctatttgctggacttgaggatagcttgaaggtgtattcatgggaacctgttatatgtcat
gatgttgttgacatgggatggacaacgcttggcgacctatgtattcatgatgagaagctt
ttgggttgctcgttctacagtaattctgttggagtatgggtgtcagatatttcgcttata
gagccatatagtggtggcttggaaactgagaaaaaagaaagcacagagcaggaacttggt
ctccagggaagacaaatggagaaagtagaagctagtgtgggactgacttttgggttgtgc
agtatgtctcctgacaatgactcaaaagagataaagaatatatatatagactcttctgga
gggaatcccgataccttactaagatccaggtcttacaattctccaaaagtagatcttcct
gaggaatccaaagaaatgctaaactggagtcctgcaacaagagctcgagaaaaacaaaat
gaagcacttagaaagtcttacattgtgccaaacgttgtacatcgggacattctcaatgat
ttggattccggaacagtttgtgatactataagcaaatctgacagtgcaaaaaatcctacc
ttccaaatgaagctaggatcccagaatgaagtcagagaatctgttgaggataaacatcct
atcaaaagtgtcacagagaagcttgaaaaaactttaacaccagacagattttctgaccaa
gagaaatgtaatcaatcctctccttacagcaaagagatgagtccagttaaatatgtcaat
ggagttgcagttttacaaggaaggacccgttctttggttgagaggtttgaaagaagggaa
agaactcccatcaatgaggatcaagctaatgcaacccccaccacaatatttgaaaataag
gaaaaaaaattcaaagatcaaactaatgcatcccccatcaccaccccaacatctgagaag
ggggaaagaattcttgtcaatgaagatcaaaacaatacgtctgcaatttccaacacaacc
agtgaaactgacacgtctgctaacttcttgaaagttgaacctcaagtttttggaagggat
tcaaactccgcaaatgatggagagataattgaaggtctgatgcaaactcatgatgtaaca
ttaagtaatcttcgttcacgtttgacaaaattacaggtagtgcgacatttttgggagcag
aatgatactaaaagtgccatcagtgctttgagaaaattgcctgatctatctgttcaagct
gatgttatcagtgtccttgttgagaagatggagattctcaccttagatttattttcttgt
ttacttcctgtgctcacaggtttgttggatagcaatatagaaagacatgtgaaggtgtca
ctggatatgctgcttaagcttgtggcagtttttggtccaacagtacgttcaaccatttca
gcacctccctctgttggggttgatctacatgcagagcaaaggcgagaatgctccaatcag
tgctttatgcaactgcaaaagattcggctgattcttccaatattaatacggaggggtggc
ttattggccaagtctgcgcaagagctgaatttagttcttcaacaaccctaa

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