Glycine soja (wild soybean): 114419525
Help
Entry
114419525 CDS
T06057
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114419525
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114419525
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
114419525
Protein phosphatases and associated proteins [BR:
gsj01009
]
HAD phosphatases
Fcp/Scp phosphatases
114419525
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114419525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
114419525
NCBI-ProteinID:
XP_028241009
LinkDB
All DBs
Position
7:38501140..38512405
Genome browser
AA seq
956 aa
AA seq
DB search
MRMYKSVVYQGEVVVGEVDVYPEENNNYKNFHVKEIRISHFSQPSERCPPLAVLHTVTSC
GVCFKMESKTQQQDGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNVDRPCFWGFIVA
LGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRISGMQA
EVKRYQDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRLQDKNIILT
RINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSNL
INSKELLGRIVCVKSGLKKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPRVHVVPAFA
PYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDIPSPPDV
SNYLVSEDDGSISNGHRDPFLFDGMADAEVERKLKDALSAASTIPVTTANLDPRLTSLQY
TMVPSGSVPPPTAQASMMPFPHVQFPQPATLVKPMGQAAPSEPSLHSSPAREEGEVPESE
LDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQTSAPHVPSSRGVWFPAEEEIGSQPL
NRVVPKEFPVDSGPLGIAKPRPHHPSFFSKVESSISSDRILHDSHQRLPKEMYHRDDRPR
LNHMLSSYRSFSGDDIPFSRSFSSHRDLDSESGHSVLHADTPVAVLQEIALKCGTKVDFI
SSLVASTELQFSMEAWFSGKKIGHRVGRTRKEAQNKAAEDSIKHLADIYLSSAKDEPGST
YGDVSGFPNVNDSGYMGIASSLGNQPLSKEDSASFSTASPSRVLDPRLDVSKRSMGSISS
LKELCMMEGLDVNFLSAPAPVSTNSVQKDEVHAQVEIDGKVFGKGIGLTWDEAKMQAAEK
ALGSLRSKLGQSIQKRQSSPRPHQGFSNKRLKQEYPRPMQRMPSSARYPRNAPPIP
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgtataaatcggtggtgtaccagggggaggtggtggtgggtgaggtagatgta
tacccagaagagaacaacaactacaagaacttccatgtgaaggaaatcagaataagccac
ttctcgcaacctagtgagaggtgtcccccacttgctgtgcttcacactgttacttcgtgt
ggtgtttgcttcaaaatggagtcaaagactcagcagcaggacggcctctttcaattgcac
tccttgtgtatcagagagaacaagactgctgtaatgccactgggtggggaggaaatacat
ttggttgcaatgcattcacggaatgtcgatagaccatgcttctggggatttattgttgcc
ttgggactttacgattcatgtcttgtgatgctaaatcttagatgtttgggtatagtgttt
gatctggacgaaacactcattgtagcaaatacaatgcgatcatttgaggatcgaattgat
gcactccagagaaaaataaactctgaagtagatccacagagaatttccggtatgcaggca
gaggtcaagcgctaccaagatgacaagaatatattgaagcaatatgctgaaaatgatcag
gttgttgataatggtagagtgataaaagttcaatctgagattgttccggcattatctgac
agtcatcagcctatagttcggccactgatacggttacaggataagaacattattctgacg
cgcatcaatccacagattcgtgatacgagtgttcttgtgaggttgagacctgcatgggaa
gatcttcggagctacttgactgcaagagggcgcaagcgttttgaggtttatgtctgcaca
atggctgaaagggactatgcactagaaatgtggagacttcttgatccagattcaaatttg
ataaattctaaagaactattaggtcgcattgtatgcgttaagtctggtttgaagaagtca
ttgttcaatgtcttccaagatggtttatgccatccaaagatggcattggtaattgatgat
cgcttgaaagtgtgggatgagaaggatcaacctcgggtgcatgttgtccctgcatttgct
ccatactatgctcctcaagctgaagcaagcaatactatccctgtcctatgtgttgcaaga
aatgttgcttgcaatgttaggggtggcttctttaaggattttgatgatggtcttttacaa
aagattcctcaaattgcctatgaagatgatatcaaagatataccttctcctcctgatgtg
agcaattatctagtttcagaggatgatggctctatttccaatggacaccgagatccattc
ttgtttgatggcatggcagatgccgaggtagaaagaaaattaaaggatgcactatcggca
gcttcaactatccctgtgacaactgctaatctagatcccaggctcacttctcttcagtac
acaatggtgccttctggttcagttcctcctccaacagcacaagcatctatgatgccattt
ccccatgtacagttccctcaacctgctacactagtaaagccaatgggtcaagctgcccct
tccgaacctagcttgcatagctctcctgctagagaagaaggtgaagtacctgaatcagaa
ttagacccagatacaaggcgtaggcttctcatattgcaacatggacaagacaccagggat
catgcatctgctgagcctccatttcctgttagacatcctgtgcaaacctctgctcctcat
gttccatcatcacggggggtttggtttcctgcagaagaggagattggttcacagccacta
aaccgggtagtacctaaagaatttcctgtagattctggtccattgggtattgcaaagccc
cggcctcatcatccctcctttttctctaaggttgaaagttctatttcatctgatagaatt
ctccatgacagccaccaaagattgccaaaggagatgtatcacagagatgatcgcccaaga
ttaaaccatatgctctctagttatcgttctttttctggtgatgatatcccctttagtagg
tcattttccagccacagggatcttgactctgaatctggccattctgtattgcatgcagat
actccagttgcagtactacaggaaattgcactgaagtgtggaactaaggtggactttatt
tcatctctggttgcaagcactgaactgcagttctccatggaggcatggttttctggaaaa
aaaattggtcacagagttggcagaactagaaaggaagctcaaaataaggctgctgaggat
tctatcaaacatttggcagatatatatttgtctagtgccaaggatgagcctggttctaca
tatggcgatgtgagtgggtttcctaatgtaaatgacagtggttacatgggtattgccagc
tctcttggtaatcagccattgtctaaagaggattcagcttcattttcaactgcatctcca
tcaagagttttagatcctaggttggatgtctctaagaggtcaatgggttcaatctcttcc
ctgaaagaattgtgcatgatggagggtcttgatgtcaattttctatctgcacctgctcca
gtgtcaacaaattcagttcagaaagatgaagtacacgcacaggttgaaatagatggcaag
gtctttggtaaaggtattggattaacatgggatgaggctaaaatgcaggctgccgagaag
gcacttggaagtctaagatcaaagcttggccaaagcattcagaaacggcagagctctccc
aggccacatcagggattttcaaataaacgtttaaagcaagaataccctcgaccaatgcag
cggatgccctcatcagctagatatcccaggaatgctccaccaattccttga
DBGET
integrated database retrieval system
