Glycine soja (wild soybean): 114419536
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Entry
114419536 CDS
T06057
Name
(RefSeq) uncharacterized protein LOC114419536
KO
K07456
DNA mismatch repair protein MutS2
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114419536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114419536
DNA repair and recombination proteins [BR:
gsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114419536
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
CReP_N
KIF9
RNase_Y_N
Motif
Other DBs
NCBI-GeneID:
114419536
NCBI-ProteinID:
XP_028241030
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Position
7:38602340..38608761
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AA seq
914 aa
AA seq
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MQLSSNVLIPANKPPRPLFFKPRFCSNPNSPESNSLQAETLKTLEWGSVCKQLSAFTSTS
MGSAAALNARLPIGRTRRDSQRLLDQTSAARLVAEPLDFSGVHDLTEILGVATSGHLLTI
RELCTVRHTLAAARELFDALKRVASASNHPQRYLPLLDILQNCNFQVGLERKIEFCIDCK
LSIILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCVGIR
ASHRYLLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASEIAN
SESDINHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQEDDD
LTVNIVGIRHPLLLESSLENISDNLTLRSGNAAEFGNGNGTMASKYTPQGISDFPVPVDF
KIGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILADIGDH
QSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLKDRVN
LAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTFRILWGCTGDSNALSIAQSIGFDR
NIIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVYNEIQGE
AEDLDQREMELMAKETQQVQHELEHAKSQIETVIQKFEKQLRISGRDQLNYLIRESESAI
ASIVKAHTPADSFPINEADRALYTPQIGEQVHVKGLGGKLATVVESPGDDGTIMVQYGKV
KVRVKKSNIIAIPSSRKNAVTSSSSTHQGRQSLRNGEYRDNVDNKTNDDISYGPVVRTSK
NTVDLRGMRVEEASIQLEMAINASRPYSVLFVIHGMGTGAVKERALQILQNHPRVTNFEP
ESPMNYGSTIAYVK
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcagcagcaacgtactgattccggcgaacaaacccccaagaccgttattcttc
aaaccccgattctgctccaaccccaactcgcccgagtcgaactcgctccaagccgagacc
ctcaagactctagaatggggctccgtgtgcaagcagctctcggcgttcacctccacctcc
atgggctctgccgccgccctcaacgcccgcttgcccatcggccggacacgccgcgacagc
cagaggctcctcgaccagacctccgccgccagactcgtcgccgagcccctcgacttttcc
ggcgtccacgacttgacggagattctcggcgtcgccacctccggccacttgctgaccatc
cgagagctctgcaccgttcgccacacgctcgccgccgccagggaactgttcgatgctttg
aaacgcgtcgcttccgcttctaatcatccacaaaggtacttaccccttctcgatatactc
caaaattgtaatttccaagtaggcttggagcgtaaaatagaattttgcatagattgcaag
ctttcaataattcttgatagagcaagtgaagacctggagatcatcagatcagaaagaaag
aggaacatagaaattttggattctttgttgaaggaagtatcttcccaaatttttcaggca
gggggaattgatagaccattaatagttaagcgtcgatctagaatgtgtgtgggaattagg
gcttcacatagatatttgcttccagatggtgtagttctgaatgttagcagctctggggca
acttactttatggaacccaaagatgcaatagatctgaacaacttggaagttaggctttca
agctctgagaaggccgaggaaagtgtaattttgagtatgcttgcatctgaaatagcaaat
tcagaatcagatataaatcatttattggataaaattcttaaggttgatcttgcttttgca
agagctgcatatgctcaatggatgaatggggtatgtcccattttcagcttaggtaatttt
gaaggccgtgattccgttgaagatgatgatgataccttggtcacacaagaggatgacgat
ttaacagtaaacattgttggtatacgacatccattactcctggagtcctctctagagaac
atttcagacaatcttacactaagatctggaaatgctgctgagtttggtaatggaaatgga
acaatggcttctaaatatacgccacaaggcatatcagacttccctgtgccagttgatttt
aaaattggacatggaactcgcgtggtggtgatctcaggtcctaatactggagggaaaact
gcttccatgaaaacattgggcctggcatcacttatgtcaaaggctgggatgcatttgcct
gccaagaaaaatccaaaacttccttggtttgaccttatccttgcagatattggagatcac
cagtcccttgaacaaaatctctcaacttttagcgggcacatatcacgtatttgtaagatt
ttggaagtggcctcaacacaatcacttgttctcattgatgaaattggtggtggaactgat
ccttcagaaggtgttgctctttctgccagtatcttacaatatttgaaggatcgtgttaac
ttggctgttgtaaccactcattatgctgatctgagtagtatgaaggaaaaggatacccgt
tttgacaatgcagcaatggaattttcacttgaaacattgcaaccaacttttagaatcctt
tggggatgtactggtgattcaaatgcgttaagcatagcacaatctattggctttgataga
aatataattgatcgtgcacaaaaatgggtagaaaagtttaaaccagaacagcagcaagag
cggagaggaatgctctatcagtcactacaggaggaaagaaaccagttaaaggctcaggct
gaaaaggctgcatctgttcacgcagaaattatgagtgtgtacaatgagatccaaggggag
gcagaagaccttgatcaacgtgagatggaacttatggcaaaggaaacacaacaggttcaa
cacgagctagagcatgcaaaatctcagatagaaactgtgatacagaaatttgagaagcaa
ctcagaatttctggtcgtgatcaactcaattatcttattagagaatctgaatctgcaatt
gcctccattgtaaaagctcatactcctgctgatagttttcccatcaatgaagctgatcgt
gctttgtatactccacaaattggagagcaagtccatgtaaagggattggggggtaaattg
gctactgtggtagaatcgcctggcgacgatggaacaatcatggtacagtatggtaaagtg
aaagttcgtgttaagaaaagtaacatcatagctattccatctagtagaaagaatgctgta
actagttcttcttccacacatcaggggaggcagagtttgcggaatggagaatacagggat
aatgtagacaacaaaaccaacgatgatatttcttatggtccagtggtgcgtacatctaag
aatactgtggacctacgaggtatgcgagtagaagaagcttctatccaacttgagatggca
attaatgcgagtcggccatattcggttctctttgttatacatgggatgggcactggtgct
gttaaggagcgtgcacttcagattctgcaaaaccacccacgtgttaccaattttgaacca
gaaagtccaatgaattatggtagtactattgcttatgtcaagtga
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