Glycine soja (wild soybean): 114419991
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Entry
114419991 CDS
T06057
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114419991
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsj01002
]
114419991
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114419991
04121 Ubiquitin system [BR:
gsj04121
]
114419991
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114419991
Peptidases and inhibitors [BR:
gsj01002
]
Metallo peptidases
Family M67
114419991
Membrane trafficking [BR:
gsj04131
]
Endosome - Lysosome transport
Others
Others
114419991
Ubiquitin system [BR:
gsj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
114419991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
114419991
NCBI-ProteinID:
XP_028241626
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All DBs
Position
7:44427930..44437571
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AA seq
504 aa
AA seq
DB search
MTIDLDSIARRVEVDNRIPIRYYYRIADNLLKQATIYREENNVVDLYIILLRFLSLVSET
IPYHRDYQASLPNERAAYKKRSRAVLDELESLKPEFKRRVEKMNDSHVKAPFPEENGFNK
ALQSSVNSSLEWPAVSKQPTAGFSSHSSWNYDNMLSLDSRPIDKQFQKLSLSLPPPNKET
LSRHSFLGPNGLRGQWLGPSAEIKVQYPSSSDLTHAKDSSLNQAGLYDLGAIKDGDQGPV
TSTMDSVLSLDDGSWLRPAVESCSPVVTESREDPLQLLNIKQPLPPPVLAQVYPEHAPIP
PSKVADPRPGPAKSSHDSGLGSTTYQHLHIPVKMMEDFLRLASENTRKNLETCGVLAGSL
KKRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDSLSLFPLGWIHTHPSQTCFMSSVDL
HTHYSYQIMLPEAIAIVMAPTDTTSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEPEDGTP
IYEHCSHVYMNANLKFDVVDLRER
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgacttggattcgatcgctcgcagagtcgaggttgataatcgcattccaatc
cgctattactatcggattgccgataacctcctcaagcaggcaactatctaccgggaggag
aataatgtagttgacttgtacatcattctccttagatttttaagtttggtttctgaaact
ataccatatcatcgagattatcaagcttcattgcccaacgaaagagcagcatataagaag
agatcgcgagctgtgttggatgagcttgaatctttgaagcctgaatttaaacgccgggtg
gaaaaaatgaatgactcacatgtaaaagctccattccctgaagaaaatggcttcaataag
gctttgcagagttcagtgaattcatctttggaatggccggctgttagtaaacagcctact
gctggattcagttcacactcttcatggaattatgataatatgttatctttagattccagg
cctattgacaagcagtttcagaaactatctcttagtctaccccctccaaataaggagact
ttgtccagacactcatttttaggaccaaatggccttcggggccaatggcttggacctagt
gctgaaataaaggttcaatatccaagcagtagtgatctcacacatgccaaggattcaagc
ctgaatcaggctgggctatatgatcttggggcaattaaagatggcgatcaaggacctgtt
acatccacaatggactcagttctctccttggatgatggaagttggttgcgtcctgctgtt
gagtcctgttctcctgttgtaactgaatcaagggaggaccccttacaattgctcaacatc
aagcaacctttgccgcctcctgttcttgctcaggtgtacccagaacatgcccctattcct
ccttcaaaagttgcagatccaaggccaggaccagctaaatcatctcatgattctggactt
ggttcaactacatatcaacacctacatattcctgtcaaaatgatggaagattttttgaga
ttagcttcggaaaacacacggaagaacttagagacatgtggtgttcttgcaggatccctg
aaaaaaagggtattccatatcacaacacttataatcccaaagcaggaatcaacttcagac
tcgtgtcaaacattgaacgaagaagaaatatttgaagttcaagacagcttatcacttttt
cctttaggttggatacatacacacccgtcacagacttgtttcatgtcttctgtagatcta
cacactcattactcataccagatcatgttaccagaggcaattgctattgtcatggcccct
acagatactacaagtccacatggcatattccatctgtctgatccgggtggtgtgtctgtc
attcgtaactgtcaacaacgtggatttcatccccatgaggagcctgaggatgggactcca
atatatgagcactgttcccatgtctatatgaatgctaacttgaagttcgatgttgttgac
cttcgagagcgatga
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