Glycine soja (wild soybean): 114420003
Help
Entry
114420003 CDS
T06057
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114420003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114420003
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114420003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Utp12
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_LRRK2
Beta-prop_ACSF4
WD40_Gbeta
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
TP_0598_N
PQQ_2
Motif
Other DBs
NCBI-GeneID:
114420003
NCBI-ProteinID:
XP_028241641
LinkDB
All DBs
Position
7:complement(44562741..44574909)
Genome browser
AA seq
626 aa
AA seq
DB search
MASTDVRGILTAFNPSLDFFAITAGDGRVKIWDTLKGQVHTEFADITSTHSTATTLHHKS
SINGHLALDYTCIKWFSFEKKRKRKHISSLLVLGTGGGDVLALDVASAQLTWRLTDCHPG
GVRAIASSANVSSIYTAGVDGMVCVIDFMTGNLLEKFKASTKPVSCMSVSPDGNTLATAA
AQLKIFNCSNHKKIQKFSGHPGSVRCMLFTEDGKYVLSSAVGERYVAVWRIDGAKKQSAS
CVLAMEHPAVFLDSRCIDSGEHDEAGICVLAISEIGICYLWFGNSIEELRNAKPTKISLS
LEDMPSRNYKGALPAIYAAKLQGIQKPASGQVFLVYGLLVKPSFRKILVHSGADIKLNVS
HDGVLLPMSQSLVKYKKGTNAQTATALDRANAEDALLPIPKVFDSHEKEKAFQNSLDKDV
IDDFHRSSKDDSVEIEDDMAQSEIDVICMEDRMRSLGMISSESDYASNIELCCKLLKGID
LEATIPVKKIRAAVLSMKSTKAWKLLEVLLAAWKSRSSSGKYILPWIYSILVNHDLNHIP
RQYVTCTLNSLDKITNFRGATHQPLLQLSGRLQLLTSQIEKASQTISHPVHELQMQESED
EDEDEVEDEYYHEEDDGSEMSTDDES
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacggacgtcagaggcattttgacagctttcaatccttctctcgacttcttc
gctatcaccgccggagacggtcgcgtcaagatatgggacacactgaagggtcaggtccac
accgagttcgctgatatcacctcaactcattcaactgctactaccttacatcataaatca
tccattaacggccatcttgcgctagattatacttgcatcaagtggttctccttcgaaaaa
aagaggaaaaggaagcatatatcctccttgttagtgcttggaactggtggcggtgatgtt
ttagcacttgatgtcgcttctgctcaattgacttggagacttactgactgtcatcctgga
ggtgtgagagccattgcatcttcagcaaatgtgtcaagcatttatactgctggtgtagat
gggatggtatgtgtgatagatttcatgacaggaaacctgttggagaaatttaaagcttct
acaaagccagtatcctgcatgtctgtttctccagatgggaacacattagctactgcagca
gcacaattgaagatttttaactgttctaatcacaaaaagattcaaaagttctctggtcat
cctggatctgttcgatgcatgcttttcactgaagatgggaagtatgtcctctcgtctgct
gttggagaaagatatgttgctgtttggaggatagatggtgctaaaaagcagtcagctagt
tgtgttcttgcgatggagcaccctgctgtctttcttgatagcaggtgcattgatagtggg
gaacatgatgaggctggcatatgtgttttggcaatctcagaaattggcatttgttattta
tggtttggtaatagtatcgaagaactgcgtaatgcaaaacccacaaaaatatccttatct
ttagaagacatgccctccagaaattacaagggagctctgccagcaatatatgctgcaaaa
ttacaaggcatccagaagccagcctctgggcaagtttttcttgtttatgggttgcttgta
aaaccatcatttagaaaaattctagtgcattctggtgcggacataaaattgaatgtctct
catgatggtgttcttcttccaatgagtcaatctcttgttaaatataagaaggggacaaat
gctcaaacagctactgcactagaccgagctaatgctgaggatgccttgcttccaattcct
aaggtttttgattctcatgagaaagagaaagcatttcaaaactctctggacaaggatgta
attgatgatttccatagaagtagtaaagatgattctgttgagatagaagatgatatggca
caaagtgagattgatgtaatttgcatggaggaccggatgagatctctagggatgatttcc
agtgaaagtgactatgcatcaaacattgaactttgctgtaagttgttgaagggtattgat
ctggaagctactattccagtgaaaaagataagagcagctgttttgtctatgaagtcaacc
aaagcatggaagctactggaagtgttactggctgcatggaaatcaaggtcatctagtgga
aagtatattcttccatggatatacagcatattagtgaatcatgatctcaatcacattcct
cggcaatatgtgacatgtacactcaattccttagacaagattaccaattttagaggggca
actcatcagcctttgttacaattatcaggtcgtctgcaactcctgacatcacagattgag
aaggcttctcagactataagccatccggtgcatgaactccaaatgcaagaaagtgaagat
gaagatgaggatgaggttgaagatgaatattatcacgaggaagatgatggttctgaaatg
agtactgatgatgaaagctag
DBGET
integrated database retrieval system
