Glycine soja (wild soybean): 114420241
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Entry
114420241 CDS
T06057
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114420241
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114420241
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
114420241
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
114420241
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
TPR_DNAAF5
PB2_cap-binding
Xpo1
HTH_61
Motif
Other DBs
NCBI-GeneID:
114420241
NCBI-ProteinID:
XP_028241946
LinkDB
All DBs
Position
7:46334657..46350929
Genome browser
AA seq
1655 aa
AA seq
DB search
MAQLQLKELGSKLETLPTSKDALVKLLKQATTCLAELDQSPSTSTLESMKPFFNAIVKPE
LLKHQDRDVKLLVATCVCEITRITAPEAPYSDEILKDIFQLIVGTFRGLSDTNGPSFGRR
VVILETLAKYRSCVVMLDLECNDLVHEMFSIFFVVARDDHPESVLSSMQTIMVVLLEESE
DVRDDLLSILLSKLGREKKGVNMAARRLAMNVIQQCAGKLEPIIKQFLLSLISGDSKPVN
SQVEYHGIIYDLYCCAPQILSRILPYVTGELLTDQLEIRLKAMNLVGDIISLPGSSIPEA
FQSIFSEFLKRLTDRVVDVRMSVLEHVRNCLLLNPFRAEAPQIISALCERLLDFDENVRK
QVVAVICDVACHALNAVPLETVKLVAERLRDKSLLVKKYTMERLTEVYRVACEKSSDNVN
PNEYNWIPGKILRCFYDKDFRSDIIESVLCGSLFPVEFSISDIVKHWIGIFSGFDKVEVK
ALEKILEQKQRLQQEMQKYLSLRKMSQDKDIPEVQKKIVFCFKVMSRSFADPIKAEESFQ
ILDQLKDANIWKILTNLVDPNTSLHQSRAYRDELLKILGEKHCLYEFLNTFSVKCSCLLF
NKEHVKTILLEIIAKKSAENAQRTQSCMNMLVIIARFSPLLLRGSEEELVNLLKDNNDTI
QEGVLNVLAKAGGTIREQLAVTSSSVDLILERLCLEGSRRQAKYAVHALAAITKDDGLKS
LSVLYKRLVDMLEDKTHLPAVLQSLGCIAQTAMPVYETRENEIEEFILNKILKSDSKEDN
MKTSWDDKSGLCMLKIYGIKTFVKSYLPVKDAHVRPDIDRLLDILRNILLYGEISKDLKS
SSVDKAHLKLASAKAVLRLSRLWDHKIPVDLFHLTLRVSEISFPQAKKIFLSKIHQYIKD
RLLDAKYGCAFLFNIFGSKPDEFAEGKQNLFDIIQMHHQLKARQLSVQSDANSLTTYPEY
ILPYLVHALAHNSCPNVDYCKDVGAYDDIYRQLHLILSMLLQRDEDAKSEVTTDKEKEVI
STITSIFLRIKHSEDVVDTSKSKNSHALCELGLAITKRLVQKDVDFQGLSHLVSLPPLLY
KASEKEGDDTLVTEVKSWLADESALTHFESLELETVQSQSAEDEASKDDEKDGNEIPLRK
MLKNIKSQGTSGKKVKRNKSVPAETKKTGNDFDILNMVREINVDNLGTPTNFEPSNGHDH
SLIKKELKDPEYATGKKRKASKTTPVPVPKRRRSSSAHGKLRLSTSISKASRRVSGVDSP
QPKLPLDEEVNPDADSKTMQRKMVKGSEKDLLLSSLKRKVKGSDSYHNDELNKPDEHDMM
SPDSTQQSDKTVGKNNKSSTGSTKKGKRKSISGLAKCTTKEGEIDTEDLIGCRIKVWWPT
DKKFYGGTIKSYDPLKGKHVILYDDGDVEILRLEKERWELIDKGRKSIKKIKLSSFEASG
QKHKGSSGSQSKKAKKIINGKQSPSKPVKRASKNNFHQEDAKEPSKISNPEETTTSKADE
MYSGGSDEELTGGFNEIMTKEKKSNKNTKSISRGKRLNKEKNFHYTEESDEEKQDCSGRL
SEDRESVPQGSSEEREVDESSGALRENINGQEFDSEGHHDNSKADRSPREMEKSHIEPSK
SPDDDDDDTIAEISDDVPLSKWKHRTGKKSSGKEQ
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttgcaactgaaggagctgggatccaagctcgagacccttcccacctccaaa
gacgctctcgtcaagctcttgaagcaagcaaccacatgccttgcagagttggaccagtca
ccttcgacatcaacattggagtcaatgaagccattttttaatgcaattgttaagccagaa
ttgctgaagcaccaagatagggatgtcaagcttctagtagcaacttgtgtttgtgagata
actcggatcactgcacctgaagctccctacagtgatgaaattctaaaggatatctttcag
ttgattgttggcacttttcgtggtctaagtgataccaatggtccatcctttggccggaga
gttgttatattggagactctcgcgaaatatagatcatgtgttgtgatgttggatcttgaa
tgcaatgatctggtacatgaaatgttcagtattttcttcgtggttgccagagatgatcat
cctgaaagtgttctgtcatccatgcaaactataatggtggttctcttagaagagagtgag
gatgtccgtgatgatcttttatctattctactatctaaattaggtcgtgaaaaaaaaggt
gttaatatggctgcaaggaggctggctatgaatgtcatacaacaatgtgcaggaaaactt
gaacccatcattaaacaatttttactatcattaatttctggagatagcaagccagtgaac
agtcaagtcgaataccatggaattatctatgatctgtattgctgtgctcctcagatcctg
tctagaattctcccttacgtgactggagagctactgaccgaccagctggaaatccgtttg
aaagctatgaacttggttggtgacataatttctcttcctggatcttccattcccgaagca
tttcagtctatattttcagaatttttgaagagattgactgatagagttgttgacgttcgc
atgtcggtccttgagcatgtaaggaactgtctgctgttaaatcctttcagagctgaagct
cctcaaataatatctgccctttgtgaacggttgctggatttcgatgaaaatgttcgaaag
caagttgtagctgttatctgcgatgtggcatgtcatgccctaaatgctgttccacttgaa
actgtgaaacttgttgcagaacggcttcgtgataaatctctacttgttaaaaagtataca
atggagagattaactgaagtgtatagagttgcttgtgagaagagcagtgacaatgtcaat
cctaatgaatacaactggattcctgggaagatccttagatgtttttatgataaagatttc
cgatctgatataattgaatctgttctctgtgggtccctgtttcctgtagaattttcaatc
agtgatattgttaaacattggattgggattttctctggatttgataaagtggaggtaaag
gctcttgaaaagatactggagcaaaaacaaaggttacaacaagagatgcagaagtatctg
tctttgaggaagatgagtcaggataaagatattcccgaggtccaaaagaagattgttttc
tgtttcaaagtaatgtcccgttcgtttgctgaccccataaaagctgaagagagtttccag
attctggatcaattaaaagatgctaatatctggaagattttgacaaatcttgttgatcca
aatacgagcctccatcaatctcgggcctaccgggatgaattgcttaaaatacttggagaa
aaacattgtctctatgagtttctgaataccttctctgtgaagtgctcttgtttgcttttt
aacaaggagcatgtaaaaacaattcttttagaaataatagctaaaaaatctgcagaaaat
gctcagcgtacacaatcttgcatgaatatgttggtgataattgctcgtttcagtccattg
ctccttcgtggcagtgaagaggagctggtgaatttactgaaagataataatgatacaatt
caggaaggtgttctgaatgttttagcaaaggctggtggtactattcgtgaacaacttgcc
gtcacatcaagttctgtagaccttatattggagagactatgtttagaaggcagtcggagg
caggcaaagtatgctgtccatgcactggctgcaataacaaaggatgatggcctcaagtct
ctctctgttctatacaagagacttgtagatatgctggaagataaaacacatctgcctgca
gtacttcagtctctggggtgtattgcgcagacagcaatgcctgtctatgaaaccagagag
aatgaaattgaagaatttatactaaacaagattctaaaaagtgatagtaaagaagataac
atgaaaacatcttgggatgataaaagtggtctttgtatgttgaagatatatggcattaaa
acatttgtaaagagctacttgccagtcaaagatgctcatgttcgtccagacattgatagg
cttctggatatccttaggaatattttattgtatggtgaaatatcaaaggatttaaaatca
agttcagttgataaggcccatttgaagcttgcttctgcgaaggcagttcttcgtttgtct
agactttgggatcacaagatacctgttgatctttttcacttaactttaagggtgtctgag
attagttttcctcaagctaagaagattttcttgagtaaaattcaccaatatatcaaagac
cgccttttggatgccaaatacgggtgtgctttcttattcaacatatttggatccaagcct
gacgagtttgcagagggtaaacagaacctctttgacattattcaaatgcaccaccagttg
aaggcacggcaactttctgtgcaatcagatgcaaattccttgaccacttaccctgaatac
attcttccatacctagttcatgcacttgctcacaattcatgtcccaatgttgattattgc
aaggatgttggagcatatgatgatatataccggcagttgcacctaatattgtcaatgcta
ctgcaaagagatgaagatgccaagtcagaagtaactactgacaaagagaaggaagttata
tctaccatcacttctatctttctgaggatcaagcattctgaagatgtggttgacacatca
aagtcaaagaattctcatgcattatgtgagcttggtttagcaataaccaaacgcttagtt
cagaaggatgttgattttcaaggattgtcccatttggtttctctacctccattgctatac
aaagcatctgagaaggaaggagatgacactttggtaactgaagttaaaagctggttggct
gatgaaagtgccttgactcactttgaatctcttgaactagaaacggttcaatcccaatca
gcagaggatgaagcttcaaaggatgatgaaaaagacggcaatgaaatacctttgcgaaag
atgttaaagaacataaaatctcagggaaccagtgggaaaaaggtgaaaaggaataagtct
gtgccagctgaaacaaaaaagactggaaatgattttgacatcttaaatatggtcagagaa
attaatgtggataacttggggacccccactaattttgaaccaagtaacggtcatgaccat
tctctgattaaaaaggaactgaaggatccagaatatgcaacaggtaaaaagagaaaagct
agcaaaacaacacctgttccggtgcctaaacgtaggcggtcttcctctgctcatggaaaa
ttgagattatcaactagtatatcaaaggcatctcgaagagtttcaggagtagactcccct
caacccaaattaccgcttgatgaagaagttaaccctgatgcagatagcaaaaccatgcag
agaaaaatggtcaaaggaagtgagaaagatttgttattgtcctcattaaaacgaaaagtt
aagggttctgacagttaccataatgatgagttgaacaaacctgatgagcatgacatgatg
agtcctgatagtacacaacaaagtgataagactgtaggaaaaaataacaagtcttccaca
ggatctactaaaaaggggaaaagaaaaagtatttcaggattggctaagtgcacgacaaag
gaaggtgaaattgataccgaagatctaattggctgcagaattaaagtttggtggcctacg
gataagaaattttatggaggcaccatcaagtcctatgaccctttgaaagggaagcatgtg
atattatatgatgatggagacgtagaaatacttcgtttggaaaaggagcgctgggagctt
attgacaagggccgtaaatctatcaagaagataaaactctcttcatttgaagcttctgga
caaaagcataaaggttcaagtggctcacaaagtaaaaaggcaaaaaaaataatcaatggt
aaacaatctcccagcaaacctgtgaaacgtgcatcaaaaaataattttcatcaagaggat
gccaaagagccttcaaagatatcaaatcctgaagagactacaacctctaaagcggatgaa
atgtactccggtggatcagatgaggagttgactggaggattcaatgaaattatgacaaag
gagaagaaatctaacaaaaatacaaaatcaatttccagaggaaagaggctaaacaaagag
aaaaacttccattatacagaagaatcagatgaagagaagcaggattgtagtgggaggctt
tctgaagatagggaaagtgtcccacaaggtagttctgaagagagagaagtggatgaatca
agtggagctttgagggaaaatattaacggacaagaatttgattctgaagggcatcatgat
aacagcaaagctgaccgtagtcctagagaaatggagaaatcacatatagagccatcaaaa
agtcctgatgatgatgacgacgacacaattgctgagatttctgatgatgtgcctctgagc
aaatggaaacataggacggggaagaaaagctcagggaaagaacaatga
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