Glycine soja (wild soybean): 114421002
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Entry
114421002 CDS
T06057
Name
(RefSeq) 20S-pre-rRNA D-site endonuclease nob1-like
KO
K11883
RNA-binding protein NOB1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114421002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114421002
03051 Proteasome [BR:
gsj03051
]
114421002
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
114421002
Proteasome [BR:
gsj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
114421002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
114421002
NCBI-ProteinID:
XP_028242543
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All DBs
Position
8:complement(1059739..1062694)
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AA seq
634 aa
AA seq
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MEETPSSVPATASCWSNVVKKQPPPPPQQHTERVLVETSDSPNAISVAVVDANAVIESGE
KLHGLADKFISIPEVMEEIRDPVSRHKLSFLPFTIQTMEPSSESINKVVKFARATGDLQT
LSDVDIKLIALTYTLEGQIHGTKHIRDAPPPVQMVNVKRLPEKDLPGWGSNVPNLDEWEA
LEHAEDASNSNSRILPLQDLSLNIVSQDEHSVDGSVEPVSEADLGIQEGGQNGLTKPRRY
LPKKKEIKIEGKTMVADGIDASQGGVDDNAGDWMPAVSRSTHRRYLRRKARREYHESLSS
NQDQQELEANVVDGSVGEDASALNPPVHQRDEEQHIENAVLEDGKVVKENKDNESIYEIM
QQMRLEEGSLEVLDEESKPSSFPKELQSDNAGLVETASDGNATVVNKPCDSGTDTIDGQS
NQLEIASQTSEVADFSCADDDDSDQSWVVRSLSESSVACITGDFAMQNVLLQMGLRLLAP
GGTQIHQLHRWILKCHACYTVTGEIGRIFCPKCGNGGTLRKVAVTVNENGIVLAARRPRV
TLRGTKFSLPLPQGGRDAVSKNLILREDQLPHRVLYPKTKKANKQDDDFFTPDSVFSHHT
DKKAPFQPPVRKAMAVFGGRRNPNDNHYSRSKHK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaactccgtcttcagttccagcgacggcatcatgctggagcaacgtggtcaag
aagcagccaccacctccaccgcagcagcacaccgagcgagtgttggtggaaaccagcgat
tcccccaatgccatctccgtagccgtcgtggacgccaacgcagtcatcgaatccggcgaa
aagctccacggcctcgccgacaagttcatctccatccccgaagtcatggaggaaatccgc
gaccccgtttcccgccacaaactctctttcctccccttcaccatccaaaccatggaaccc
tcctccgaatccatcaacaaagttgttaaatttgctagggctaccggtgacctacaaact
ctttctgatgttgatatcaagctcatagctttgacttatactttggagggtcaaattcat
gggacaaaacatatcagggatgcccctcctcctgtgcaaatggtcaatgtgaagaggttg
cctgagaaggacttgcctggatggggttctaacgtgcccaatttggatgagtgggaggcg
ttggaacatgccgaggacgcgtccaattccaattccaggatccttcctttgcaggacctt
agcttgaacattgtttctcaagatgagcattctgtggatggttccgtggagcctgtgagt
gaagctgatttggggattcaggagggtggtcagaatggtttgacgaagccaaggagatat
ctgcctaagaaaaaagagataaagattgaggggaagacgatggtggctgatggaattgat
gcgtcgcagggaggggttgatgacaatgctggtgattggatgccggctgtcagtcggagt
actcataggagatatctaagaaggaaagctagacgcgagtatcacgagtcgttgtcaagt
aatcaagatcagcaagagttggaagcaaatgttgttgatggtagtgttggtgaagatgct
agtgctttaaatccgcctgttcatcagagggatgaagaacaacatattgaaaatgctgtg
ttggaggatggtaaggtggttaaagagaacaaagacaatgaaagtatctatgaaattatg
cagcaaatgaggctggaagaaggctcacttgaagttcttgatgaggaaagtaaaccaagt
tcatttcctaaagaactccagtcagacaatgctggattggtggaaaccgcatctgatggc
aatgcaactgtggtcaataaaccatgtgacagtgggacagatacaattgatggccaatca
aatcaattggagattgctagccagacaagtgaggttgctgatttttcatgtgcagatgat
gatgatagtgaccaaagttgggtggttaggtctttgtctgaatcaagtgtagcctgtata
actggtgactttgcaatgcaaaatgttcttctacaaatgggtttacgcttgctggcacct
ggaggaacacagatacaccagctgcacagatggatactcaagtgtcatgcctgttacact
gttactggcgagattgggaggattttctgtcccaaatgtggaaatggtggcaccttaagg
aaggtagctgtcactgttaatgaaaatggaatagtattagctgcccgtcgaccacgagtt
acattacgtggcacaaagttttcattgcctttaccccaaggtgggagggatgcagtctca
aagaacctcattctccgtgaagatcaacttcctcatagggtactttatcctaaaacgaag
aaagccaacaagcaggatgatgacttctttacaccagacagtgtcttcagccaccacaca
gataagaaagctcctttccagcctcctgtaaggaaagcaatggcagttttcggtgggagg
agaaatccaaatgacaatcactactcacgctctaagcataagtag
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