Glycine soja (wild soybean): 114421078
Help
Entry
114421078 CDS
T06057
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04142
Lysosome
gsj04144
Endocytosis
gsj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114421078
04142 Lysosome
114421078
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114421078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114421078
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114421078
Membrane trafficking [BR:
gsj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114421078
Exosome [BR:
gsj04147
]
Exosomal proteins
Proteins found in most exosomes
114421078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
ASRT
Motif
Other DBs
NCBI-GeneID:
114421078
NCBI-ProteinID:
XP_028242666
LinkDB
All DBs
Position
1:52050036..52061144
Genome browser
AA seq
1734 aa
AA seq
DB search
MAANAPIIMREALTLASVGINPQFITFTHVTMESDKYICVRETAPQNSVVMIDMTMPMQP
LRRPITADSALMNPNTRILALKAHVPGSTQDHLQVFNIESKAKMKSYQMGQQVVFWKWIT
PKTLGIVTQSSVYHWSIEGDGEPVKVFDRTANLANNQIINYRCDPTEKWLVLIGIAPGSS
DRPQLVKGNMQLFSVDQQRSQALEAHAASFATFRVAGNDKDSTLICFASKSINAGQVTSK
MHAIELGAQPGKPSFSKKQADLFFPPDFADDFPVSMQISNKYGLIYVITKLGLLFVYDLE
TATAVYRNRISPDPIFLTTEASSEGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLELA
VSLAKRGNLPGAEELVVKRFQELFAQTKYKEAAELAAQSPQGVLRTPDTVAKFQSVPVQA
GQTPPLLQYFGTLLTMGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVK
TVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQG
AVNFALMMSQMEGGCPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLEI
NLVTFPNVADAILANGMFSHYDRPRIGQLCEKAGLFIRALQHYTELPDIKRVIVNTHAIE
PQVLIATAQMTIYYIYIYIYIYIVFLQYDYNVFQGLVEFFGTLSREWALECMKDLLLVNL
RGNLQIIVQTAKEYSEQLGVDACIKLFEQFKSYEGLYFFLGAYLSSSEDPDIHFKYIEAA
AKTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTSN
MLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRL
RLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPT
LAVVAYRRGQCDDELVNVTNKNSLFKLQARYVVERMDSDLWEKVLNPENEFRRLLIDQVV
STALPESKSPDQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAVKA
DPSRVMDYINRLDNFDGPAVGEVAVEAQLYEEAFSIFKKFNLNVQAVNVLLDNLQTIDRA
VEFAFRVEEDAVWSQVAKAQLREGLVSDAIESFIRADDSTHFLEVIKAAEDADVYHDLVK
YLLMVRQNTKEPKVDSELIYAYAKIEHLGEIEEFILMPNVANLPNVGDRLYDEALYEAAK
IIFAFISNWAKLAVTLVKLKQFQGAVDAARKANSSKTWKEVCFACVDAEEFRLAQICGLN
VIIQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEH
IKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTVMNHSPEAWDHMQFKDVI
VKVASVELYYKAVHFYFKEHPDVINDMLNVIALRVDHTRVVDIMRKAGHLRLVKPYMVAV
QSNNVSAVNEALNEIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIY
KKAGRWKQSIALSKKDNLYKDCMETCSQSGDRELSEDLLIYFIEQGKKECFASCLFVCYD
IIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEAQNEEKAKEKEEKEVL
AQQNMYAQLLPLALPAPPMQGMGGGYAPSPPLPMGGMGMPPMPPFGMPPMDGGY
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaacgcccccatcatcatgcgcgaagccttaacgttggcaagtgtcggaatc
aacccgcaattcatcactttcacgcacgtcaccatggaatcggacaagtacatttgcgtc
agggaaaccgcgccgcagaacagcgtcgtcatgatcgacatgaccatgccaatgcagcct
ctccggcgccctatcaccgccgattccgcgctcatgaaccctaacaccagaattctcgcg
cttaaagctcatgttccaggcagtactcaggatcatttgcaagtttttaacattgaatcc
aaagcgaagatgaaatcgtatcaaatgggccaacaggttgtgttttggaagtggataacc
ccaaagacactaggcatagtgactcagtcatctgtgtatcattggtcaattgaaggtgat
ggtgagccagtgaaggtgtttgaccgaacagctaatttggcgaataatcagattatcaac
tatcgttgtgatcctactgaaaagtggttggttttgattggaattgcccccggttcttct
gatagaccacaacttgtaaaaggaaatatgcaactcttctctgtggatcagcagaggagc
caggctcttgaagcacatgctgcctcatttgccacatttagggttgctggtaatgataag
gattcaactcttatttgttttgcatcaaagagcatcaatgctggacaggttacgtcaaag
atgcatgccattgaacttggtgcccagccaggcaagccatcattttcaaaaaagcaagca
gatctcttcttccctccagactttgctgatgactttcctgtatcaatgcagatttcaaat
aagtatggcttgatatatgttatcacaaaacttgggcttttatttgtctatgatctagag
actgccactgcagtttacagaaatcgaatcagtcccgatcctatatttttgaccacagaa
gcatcttcagaagggggcttttatgctataaatagacgtggccaggtgttgctcgctact
gtgaatgaagcaaccattgtaccttttgttagtggccagttaaataatttggaacttgct
gttagtcttgctaaaagaggaaacctccctggtgcagaagaattggttgttaagcgtttt
caagaattatttgctcagaccaagtataaggaagctgcagagcttgctgcacaatcgcca
caaggagtacttcgtactcctgacactgttgctaaatttcagagtgtacctgtgcaagct
gggcaaacaccaccgctgttgcaatactttggaactctgttaaccatgggaaaactgaat
gcttttgagtcactggaactttcacggcttgttgtaaatcagaacaaaaagaatctctta
gaaaattggctagcagaggataaacttgaatgcagtgaggagctaggtgaccttgtgaag
acagtggataatgaccttgcattgaaaatttatatcaaagctagagccacaccgaaagtt
gttgcagcttttgcagagaggagggaatttgataagatcctgatatattctaagcaggtt
ggatacacacctgattatatgttccttcttcaaacaattttacgaactgacccccagggt
gctgtaaattttgctctgatgatgtctcaaatggaaggaggatgccccattgactacaac
accataacagatctctttcttcagaggaatttgatccgtgaggcaacagcctttttgttg
gatgtactgaagccaaatcttcctgaacatggatatcttcaaacaaaggttctggaaatt
aatcttgtgacctttccaaatgttgctgatgctatattggccaatggcatgttcagtcat
tatgatcgcccacgtattggacaactatgtgaaaaggctggcctgttcatacgggctctt
cagcattatactgagttgcctgacatcaaacgtgtcattgtgaatacacatgccattgag
ccacaggttttgattgcaactgctcaaatgacaatctattatatatatatatatatatat
atatatattgtattcttacaatatgattataatgtatttcagggtttagttgagttcttt
ggaaccctttctcgagaatgggcacttgagtgtatgaaagatcttttacttgtcaatctt
aggggcaatcttcaaataattgtgcagactgctaaggaatattctgagcagttgggtgtt
gatgcatgcattaaactctttgaacaattcaaatcctatgaaggattatactttttcttg
ggtgcatacttgagctccagtgaggatcctgatattcacttcaagtacattgaggccgct
gctaaaactgggcaaattaaggaggtagagcgcgttactagagaatcaaacttttatgat
gcggagaagacaaagaattttcttatggaggccaagcttccagatgcacgtccattgatt
aatgtgtgtgatcgttttggctttgttccggatctcacccattatctttatactagcaac
atgcttcgctatattgaaggttatgttcaaaaggtcaatcctggaaacgctcctctagta
gtagggcagttgttagatgatgaatgccctgaagattttattaaaggtcttatactttca
gttcgttctctcctgccagttgagcctttagttgaagaatgtgagaagaggaatcgtctc
cgcttgctcactcaattcttggagcatcttgtaagtgaaggaagccaggatgtacatgta
cataatgccctgggtaaaatcattattgacagcaacaacaatcctgagcattttctcaca
accaacccatactacgattctcgcgttgtcggtaaatattgtgaaaagcgggatccgacc
cttgctgttgttgcttaccgaagagggcaatgtgatgatgagcttgttaatgttactaat
aaaaattccttgttcaaacttcaagcaagatatgttgtcgaaaggatggactccgacctc
tgggagaaagttcttaatcctgagaatgagtttagacgactgttgattgatcaagtggtg
tctactgctttgcctgaaagcaagagtcctgatcaagtttcagctgcggtgaaagctttt
atgactgctgatcttcctcacgagttgattgagcttcttgaaaagattgtactacaaaat
tctgcttttagtggaaacttcaatctgcaaaatttgctgatccttactgcagtcaaggca
gatccttctagagttatggattacataaataggttggacaactttgacgggcctgcagta
ggggaggtggctgtggaagcacaactatatgaagaggcattttctattttcaagaaattt
aatttgaatgttcaggctgttaatgtcctgctggataaccttcagactattgatcgtgct
gtggagtttgctttccgggttgaagaagatgctgtttggagccaggtggctaaagcacaa
cttagagaaggcttagtgagtgatgcaattgagtcattcattcgtgcagatgattcaact
catttcttagaggttataaaggctgctgaagatgcagatgtataccatgacctggtaaag
tatcttctcatggttaggcagaataccaaagagcccaaggtggacagtgagctcatctat
gcttatgctaagattgaacaccttggagaaattgaagaatttatactgatgccaaatgtt
gccaatttaccaaatgttggagaccgcttgtatgatgaggctttgtatgaggctgccaaa
attatatttgcttttatttctaactgggctaagttggcagtcacattggtgaagcttaaa
cagttccaaggtgctgttgatgctgccaggaaagcaaatagttcaaaaacatggaaggaa
gtttgtttcgcctgtgtcgatgctgaggaattccgcttagctcagatttgtggtctcaat
gtcatcattcaggtggatgatttggaggaggttagcgagtactatcagaacagaggatgc
ttcaatgaactcatatctctaatggagagtgggttaggattggagcgtgcacatatgggt
atctttactgagttgggagttctgtatgcaagatatcgtcctgagaagctaatggaacac
attaagttgttctcaactcggcttaatattccaaagcttattcgagcatgtgatgaacaa
cagcattggaaagaacttacatacctatacatccaatatgatgagtttgataatgctgca
accaccgtaatgaatcactctccagaagcatgggaccacatgcaattcaaagatgtgata
gttaaagttgcaagtgtggagctgtactataaggctgttcacttctacttcaaagagcat
ccagatgtaataaatgatatgctaaatgtgattgctcttcgtgtggaccatactcgtgta
gtagatataatgcggaaggctggccaccttagattagttaagccgtacatggttgcagtt
caaagcaacaatgtgtccgctgtcaatgaagctttgaatgaaatttatgttgaggaagaa
gactacgacagactccgagaatcaatagatttgcatgacaactttgatcagataggtctt
gcacagaagattgagaagcatgaacttcttgagatgaggcgtgtagctgcctacatttac
aagaaagcaggaagatggaagcaatccattgctttgtcaaagaaagacaatctttacaag
gactgtatggaaacatgctctcaatctggtgaccgtgaactttcagaagatttgcttatc
tactttattgagcagggaaagaaagagtgttttgcatcatgcctctttgtctgttatgat
attatacggccagatgttgctcttgagctatcttggatgaacaatatgattgattttgct
tttccatatctcttacagtttattcgagagtatacaggcaaggtagatgagcttatcaag
gacaaaattgaagcacaaaatgaggagaaagctaaggaaaaggaggagaaggaagtactt
gctcagcagaatatgtatgcccagttgctaccgcttgctttgccagcacctcctatgcaa
ggaatggggggaggctatgccccttccccaccactacctatgggtggaatggggatgcca
ccaatgcctccttttggtatgcctccaatggatgggggctactga
DBGET
integrated database retrieval system
