Glycine soja (wild soybean): 114421220
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Entry
114421220 CDS
T06057
Name
(RefSeq) nuclear pore complex protein NUP155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114421220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114421220
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114421220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
114421220
NCBI-ProteinID:
XP_028242862
LinkDB
All DBs
Position
8:complement(3659682..3669426)
Genome browser
AA seq
1486 aa
AA seq
DB search
MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV
VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEFSGE
EQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVTLQPLPE
HTIPSDGVTMTCVACTDKGRIFLAGRDGHIYEILYSTGSGWQKRCRKICITAGLGSVISR
WVIPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGDGPLKKVAEERNLVN
QRDAHYGARQSTGSRVSSRSPKPSIVCISPLSTLESKWLHLVAVLSDGRRMYLSTSPSSG
SLTGFNTSHHKPSCLKVVTTRPAPPWGVSGGLTFGAMALAGRPQNEDLSLKVEAAYYSAG
TLILSDASPSTMPSLLVLNRDSSTQSSPSGNLGTSTRSSRALRESVSSLPVEGRMLSVAD
VLPLPDTAATVQSLYSEIEFGGYESSMESCERVSGKLWARGDLATQHILPRRRIVVFSTM
GMMEIVFNRPLDIIRRLLESNSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENLISNV
IAEKAAEAFEDPRVVGMPQLEGSNALSNTRSAAGGFSMGQVVQEAEPVFSGAHEGLCLCS
SRLLFPLWELPVMVVKGSLGPSGTLSENGVVVCRLSVGAMQVLEQKLRSLEKFLRSRRNQ
RRGLYGCVAGLGDLSGSILYGNGSALGVGDRNMVRNLFGAYSRNMESNGGITTNKRQRLP
YSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDSNLQQALVQLTFH
QLVCSEEGDHLATRLISALMEYYTGPDGRGTVDDISRRLRDGCPSYYKESDYKFFLAVEA
LERSAMTIDAEDKENLAREAFNSLSKVPESVDLRTVCKRFEDLRFYEAVVRLPLQKAQAL
DPAGDAYNDDIDATVREQALAQRELCYEIIISALRSLKGDNLQREFGTPIKSTASQSALD
PASRKKYICQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGRNSI
HEVRAVTATTSPVGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAERRSTDGV
PTLEQRCQYLSNAVLQAKNATNSDGLVGSGRISIDSGFLDLLEGKLAVLWFQIKIKEELE
SMASRSDVLPGTSDSAENGVVPEGSSTADANFANATREKAKELASDVKSITQLYNEYAVP
FGLWEICLEMLYFANYSGDTDSSIVRETWARLMDQAISRGGIAEACSVLKRVGPRIYPGD
GAVLPLDIICLHLEKAGLERLNSGVEAVGDEDVARALVSACKGAAEPVLNAYDQLLSNGA
ILPSPSVRLRMLRSVLVVLREWAMSVYSQRMGSSSATGHSLILGGGFSTERTIASQGIRD
KITSAANRYMTEVRRLALPQNQTEHVYRGFRELEESFISQHSFDRF
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggaagacgagattgtgatgcgtgatgtcacgaatgcggggcttgttgtcagc
gatcgcattggtcgcgaagtttcgtctcagctcgacctcgaagaagctctagaagcttcc
agatacgctagccacccttattccactcacccccgagagtggccccctttagttgaggtg
gtgaatacctgggagttgcctcccgtgctcattgaaagatacaatgcagctggtggggaa
ggaactgctttttgtggaatatttcctgaaatacgaagggcatgggcatctgtggacaat
tcattgtttctttggcgttttgataagtgggatggccaatgtcctgaatttagtggggaa
gaacaagctatttgtgcagttggtcttgcaaaatcaaaacctggagtttttgttgaagct
atccaatatcttttagttttagcgacacctgttgagttaattttagtaggagtatgctgc
tctggaggagcagatggttcagatccatttgcagaagttacattgcagccattgccagag
catacaataccttctgatggggttacaatgacttgtgtagcatgtactgataagggccgc
attttcctcgctggtcgggatggccacatatatgagattctgtattcaactggttctgga
tggcaaaaacggtgcagaaaaatctgcatcactgctggtttaggaagtgtaatttcaaga
tgggttataccaaatgtattcaattttggagctgttgaccccattgttgaaatggttttt
gacaacgagagacaaatattgtatgcacgaactgaagagatgaagctacaagtttatgtt
ctaggaccaaatggtgatggcccattaaagaaagtagctgaagaaagaaatcttgtcaat
cagagggatgcacattatggagctagacaatccacagggtcaagagtctcaagtcgatct
ccaaagccatctattgtttgcatctcacctttatctacacttgaatccaagtggctacat
cttgttgctgttttatctgatggcagaaggatgtacctatctacctctccttctagtgga
agcttgactgggttcaacaccagccaccacaagcctagctgtttaaaggttgtcactaca
aggcctgctcctccttggggtgttagtggtggtctcacctttggagccatggctcttgct
ggtagacctcagaatgaggatctctccctgaaagttgaggcagcttattattctgctgga
acccttatactttctgatgcatcaccttctaccatgccttcactccttgttttgaacagg
gattcaagcacgcaatcatcgccgtcaggtaatctaggaacaagtacgaggagttcccgg
gcattaagggagtccgtatcttccttaccagttgaaggacgaatgctttctgtggcagat
gttttacctttgccagataccgcagctactgtgcaatctctgtattcggaaattgagttt
ggtggttatgagagctctatggaatcatgtgaaagggtgtctggcaaactctgggccaga
ggagatcttgcaacccaacatatactaccaagaagaaggattgttgtcttcagcaccatg
ggcatgatggaaattgtttttaacaggccactggacattataaggcggctattggaatcc
aactctccacgatcagttttagaagatttcttcaatcgttttggtgcaggtgaggcagct
gcaatgtgtctaatgctagctgcaagaatagtgcattctgaaaaccttatcagcaatgtt
attgctgagaaggcagctgaagcttttgaggacccaagagttgttggcatgccacaactt
gaaggtagtaatgcattatcaaacacaagaagtgctgctggtggatttagcatgggccag
gttgttcaggaggctgagcctgttttttcaggtgcacatgaagggctctgtctgtgttcg
tctagattactttttcctctgtgggaacttcctgtaatggttgtaaagggaagtttaggc
ccttcaggcactctatctgaaaatggagtagttgtgtgcagactctctgttggggctatg
caagtccttgaacagaaactccgatctttggagaaattcttaagatctagaaggaaccag
aggaggggactttatggctgtgtagcaggtttaggagatctgagtggttcgattctgtat
ggtaatggttcggcattaggagttggggatcgaaatatggtaaggaacttatttggtgca
tattccagaaatatggagtccaatggtggcataacaactaataaacggcaaaggttgcca
tatagtcctgctgaattagctgccatggaggtgagggcaatggagtgcattaggcagttg
ctccttagatctggtgaagccctatttttgcttcaacttctttcacagcatcatgtgact
cgattgattcagggatttgattctaaccttcaacaagcattagttcagttgacatttcat
caactagtttgttctgaggagggagaccatcttgctacaagacttatatctgctctcatg
gagtattatactggtcctgatggcaggggcactgtagatgacattagtaggagattgaga
gatggctgtccaagctactataaggagtctgattacaaattcttcctagccgtggaagcc
ctggagagatctgctatgaccatagatgccgaggacaaggagaatcttgcaagggaagca
tttaattccttaagtaaagttccagagtctgtggacctacgaactgtttgcaaacgtttt
gaggatttaaggttttatgaagctgtagtgcgcttacctctacaaaaggcacaggctctt
gaccctgcaggcgatgcttataatgatgatattgatgcaactgtcagagagcaagcactt
gctcagcgggagctgtgttatgaaataattatcagtgctttgcggtctctgaaaggtgac
aacttacagagggaatttgggactcctattaaatcaactgcttcacaatctgctcttgat
ccagcctctcggaaaaaatatatatgtcaaattgttcagctgggtgtccaatcacctgac
agaattttccatgagtatctttaccaggctatgattgatttaggtcttgagaatgaattg
ctagagtatggaggtcctgatctgttgccatttttgcaaagtgctggtcgtaattctata
cacgaggttcgtgctgtgacggccacaacttctccagtggggcaatcaggagcacctatg
tcatctaatcaagtcaagtactatgaacttttggcacggtattatgtcttgaaacgccaa
catatgcttgcagctcatgcattgcttagactagctgaaaggcgttctactgatggagtt
cctactcttgaacagaggtgtcaatacctaagtaatgcagttctacaggcaaaaaatgca
actaatagtgatgggttagtaggttctggtcgaatttccattgacagtgggttcctagat
ttgcttgaagggaagctcgctgttctttggttccagataaaaatcaaagaagaactagag
tctatggcttccaggtctgatgttttacctggcacatcagattctgccgaaaatggtgta
gtccctgagggaagttctactgctgatgctaattttgcaaatgcaacacgagagaaggct
aaagagctagcttcagatgtaaagagcataacccagttatataatgaatatgctgttccc
tttgggctctgggagatatgcctggagatgctgtactttgccaattattctggtgatact
gacagcagcattgtcagagagacatgggctagacttatggatcaagctatatcaagaggg
ggtattgctgaagcttgctcggtactgaagagggtcgggccccgcatttatcctggtgat
ggagctgttttaccacttgatattatttgtcttcacctagagaaggctggactggagagg
ttaaattcaggggttgaagctgttggagatgaagatgttgcaagagcccttgtttctgct
tgtaagggtgccgctgaacctgtattaaatgcatacgaccaattgttatcaaatggggct
attctgccatccccaagtgttagattacgtatgctgagatcggttctagtggtacttcga
gagtgggcaatgtctgtatattcacaaagaatgggtagcagtagtgccactgggcattcc
ttaatactaggtggaggattctcaacggaacgtactattgctagccaaggaatccgggac
aagatcactagtgcagcaaacaggtatatgactgaagtgcggaggttagcccttccacag
aaccaaacagaacatgtctaccgaggttttagagaacttgaagaatcgtttataagccaa
cattcatttgatcgattttga
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