Glycine soja (wild soybean): 114421314
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Entry
114421314 CDS
T06057
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114421314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114421314
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114421314
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
DUF3630
Motif
Other DBs
NCBI-GeneID:
114421314
NCBI-ProteinID:
XP_028242984
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All DBs
Position
8:4586111..4591784
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AA seq
579 aa
AA seq
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MMECRRKKENQNPNSTFPDEVLERISGMLKSRKDKSTVSLVCKEWYNAERWSRRSVFIGN
CYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPANWGADIHSWLVVFAGKYPWLEELRL
KRMTVTDESLEFLALQFPNFKALSLLSCDGFSTDGLASIATNCKNLTELDIQENGIEDKS
GNWLGCFPDSFTSLEVLNFANLHNDVNFDALEKLVCRCKSLKTLKVNKSVTLEQLQRLLV
HVPQLGELGTGSFSQELTAQQCSDLESAFKNCRNLHTLSGLWVATAQYLPVLYSACTNLT
FLNFSYAPLDSDGLAKLLVHCPKLQRIWVVDTVEDKGLEAVGSHCPLLEELRVFPADPFD
EGIVHGVTESGFIAVSQGCPRLHYVLYFCRQMTNAAVATVVQNCPDFTHFRLCIMHPGQP
DYLTQESMDEAFGAVVKTCTKLQRLAVSGYLTDLTFEYIGKYAKNLETLSVAFAGSSDWG
MRCVLDGCPKLRKLEVRDCPFGNGALLSGLGKYESMRSLWMSDCNLTMNGVRLLAKEMPR
LNVEVIKEETYETHQAKKVYVYRSVAGPRRDAPPFVLTL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtgtaggagaaagaaggagaatcaaaatcccaactccactttccctgatgag
gtgttggagcgaatttcagggatgttaaagtcccgcaaggacaaaagcacggtttctttg
gtttgcaaagagtggtacaacgcagagagatggtcaaggaggagtgtgttcataggtaac
tgctactctgtgtctcctgagatcttaactcgcaggttcccaaacattagaagtgttaca
ctgaaagggaagcctcgtttctctgacttcaacttggttcctgccaattggggtgctgat
attcattcatggcttgtggtgtttgctggcaagtacccttggcttgaggagttgaggctc
aagaggatgactgttactgatgagagcttggagtttctggctctccaattccccaatttc
aaagcactttcccttctcagttgtgatggattcagcactgatggactggcttcaattgcc
actaattgcaagaatttaactgaacttgacatacaagagaatggtattgaggataagagt
ggcaattggttgggttgtttcccagacagcttcacatcattggaagtattgaactttgcc
aatctgcacaacgatgtaaattttgatgcactcgagaaactcgtctgtaggtgcaaatca
ttaaagactttgaaggttaacaaaagtgtgacactagaacagttacaaaggcttcttgtt
catgttcctcagttaggtgaacttggtactggctcattttcacaagagttgacagcacag
cagtgctcagatcttgaaagtgcgttcaaaaattgtagaaatcttcacaccctttcaggg
ttatgggtagctacagcacaatatctcccagttctgtactctgcttgcacaaatctaact
ttcttgaattttagttatgctcctcttgacagtgatggtcttgctaagcttcttgttcac
tgtcctaagcttcagcgcatctgggttgtggacactgttgaagacaaggggctagaagct
gttggatcacactgtccattgcttgaggaactgcgtgtttttcctgcagatccctttgat
gagggcattgttcatggggttactgaatcagggtttattgcagtctctcaaggatgtcca
agacttcactatgttctatacttttgccgtcaaatgaccaatgctgctgttgctactgtt
gtgcaaaactgtcctgactttactcatttccgactttgcatcatgcaccctggtcagcca
gattacttgacgcaagaatcaatggatgaggccttcggagctgttgttaagacttgcact
aaactccagaggcttgcagtatcaggttatctgactgacctaacttttgagtatataggc
aagtatgcaaaaaacttggaaactctttcggtggcttttgctggaagcagtgattggggc
atgcgctgtgtgctggatggctgtccgaagctgagaaaactcgaggtaagggactgtcct
tttggcaatggggctcttctgtcaggcttgggcaagtatgagtcaatgagatcgctgtgg
atgtcagactgcaatttgacaatgaacggcgttagattgttggccaaagaaatgcctagg
ttgaatgttgaagtcataaaggaagaaacctatgagactcatcaggctaaaaaagtttac
gtttatcgttctgttgctgggccaagaagggatgcccctccttttgttctcactctctga
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