Glycine soja (wild soybean): 114421684
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Entry
114421684 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114421684
03041 Spliceosome [BR:
gsj03041
]
114421684
03036 Chromosome and associated proteins [BR:
gsj03036
]
114421684
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114421684
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114421684
mRNA cycle factors
Common to processing body (P body) and stress granule
114421684
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114421684
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114421684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
NPF
Motif
Other DBs
NCBI-GeneID:
114421684
NCBI-ProteinID:
XP_028243538
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Position
8:complement(8689954..8696873)
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AA seq
619 aa
AA seq
DB search
MRTSWADLAANSAAENAGPGSSADNVGTGSTLAPTRPVYVPPHLRNRQPAAESPAPAPAY
SGPSSGAGSSSGAGNSGSRYAAPRNDYRPGYGGGGGRTGGWGNKSGGWDRGREREVNPFE
EEDNAEEAFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYV
KPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQPVQRPPRGVRTVYPL
ALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLV
DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPKE
IQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQA
LTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAA
RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSELMQE
ANQEVPAWLSRYAARSSFGGGRNRRSGGRFGSRDFRREGSFSRGSSDYYSAGNSSGGGYG
GSGGYAGGGYGPGVTSAWD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcatgggctgatttggctgcaaattctgcagccgaaaatgcaggtcctggt
tcttctgctgacaatgtgggaactggtagcactttagctcccacgcgacctgtttatgta
cctcctcatctgaggaaccgtcagccagcagcagaatcccctgcccctgctccagcatat
agtggcccttcttctggtgctggctctagttctggtgctggtaattctggatcccgttat
gctgcacccagaaatgattatcgtcctgggtatggtggtggtggtggacgtacaggtgga
tggggaaacaaaagtggtggatgggatcgtggcagggagcgggaagtcaatccctttgaa
gaagaggataatgctgaagaggcattcagtgagcaggagaatacaggaataaattttgat
gcatatgaagacattccagtggagaccagtggtgacaatgtgcccccacctgtgaatacg
tttgcagagattgatttgggtgaagcacttaatcagaatataagaaggtgcaaatatgtg
aagccaacacctgttcagcggcatgccataccgatatctctagctggacgggatttgatg
gcttgtgcgcagactggttctggaaagacagctgcattctgcttcccgattatcagtgga
atcatgaggggccaacctgtgcagaggccacctcgtggggtgcgtacagtgtatccgctt
gcgcttgttctttctccaacgagggagttatcaatgcaaatacatgaagaggctaggaag
ttttcataccaaactggggttagggtagttgttgcatatggtggagcaccaataaaccag
cagctgcgggatcttgaaagaggggtggacattcttgttgcaactcctggaagactggta
gatttgctggagagagctagagtttcactgcagatgattcgatatctggcattagatgag
gcagatcggatgctggatatgggttttgagccacaaataaggaagattgtagagcaaatg
gacatgcctccaccaggtgccagacagactatgttgttcagtgcaacatttccaaaagag
atacagagattggcttctgatttcctttcaaattatattttccttgctgttggaagagtg
ggttcaagtactgatttaattgtccaaagagttgagtatgttcaagagtctgacaagaga
agtcacctaatggaccttcttcatgcacagagggcaaatggtgtacaaggaaagcaagct
ttaactttagtttttgtggagactaagaagggagctgattcgctggaacattggttgtgt
cttaatggttttccagcaactactattcatggtgacaggtcacagcaggaaagagaatta
gccttgaggtcatttaaaagtggcaacacccccatattggttgccaccgatgttgctgca
cgtggtcttgatattccccatgttgctcatgtggtcaactttgacctgccaaatgacatt
gatgattatgtacaccgaattggaagaacagggcgagctggaaagaaaggtcttgcaact
gcattctttaatgataacaattcatcgctagctagagctttatcagaactgatgcaagaa
gcaaatcaagaagtacctgcttggctctcacggtatgctgctcgatcttcttttggtgga
ggcaggaaccggcgatcaggcggtcgatttggtagtcgtgactttcgaagagagggctct
ttcagtagaggttcttctgattactacagtgcgggaaacagcagtggtggtggatatgga
ggctctggtgggtatgctggtggagggtatggtcctggggtcactagtgcttgggattga
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