Glycine soja (wild soybean): 114421743
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Entry
114421743 CDS
T06057
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114421743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114421743
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114421743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
DZR
Motif
Other DBs
NCBI-GeneID:
114421743
NCBI-ProteinID:
XP_028243606
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Position
8:9373750..9381180
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AA seq
787 aa
AA seq
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MPRKVNYGLDYDDDYYDDDYDDYAYDDVDAEDYGGPDTKQETIKLGLWQCSICTYDNDES
MTFCDICGVVRRPLVNTGTSNSNKTVEDVTKSPGASKLARSLFQSLQQQIAKETVLFPKP
DDGFLTDGSNFYKLDNVRGEFHEIHKDFSTQSHPHLNIDPFKFNVPSPDDVVYTGLRSSK
TGLKDKATNSNSQLSSSTREKNELSVQSNAESSDNLSSLMQKSRQDSSTESKLSKKVAID
LQTSGKTSNSLPESLSKDKDNNINKINSSKNGTIDIQSSKEKSGSLSTRSKVKESDNISS
SSIKDGKPESISSSFSNMVVDVRFGNSDNTNAKGTHSRVSYKPEKWMLPEQAEDTLTQLN
LAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESSEERER
GITMTVAVAYFDTMRYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMDG
SKGQTREHAQLIRSFGVDRVIVAVNKMDAVAYSQDRFDFIRQQLGVFLHFCGFKDSSLSW
IPMSAMENQNLVASPSDARLKNWYGGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSTTL
GQVSASGKLEAGALRSGSKVLVMPSAVVGTVRSLERDSNACTVARAGDNVAVTLQGVDGN
HVMAGDVLCHPDFPVAVAKHLELKVLVLDGASPILVGTQLEFHIHHAKEPGRVSRILSVL
DPKTGKVTKKSPRCLSAKQSAVIEVILNETVCVVEFSSCKALGRVSLRSMGRTIAVGVVT
RIIEEQG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaaagtaaattacggactcgattacgacgacgattactatgatgatgattat
gatgactatgcttatgatgatgttgatgcagaagactatggaggacctgatacaaagcaa
gagaccattaagcttggcctttggcaatgctccatttgcacttatgacaacgatgagagt
atgactttttgtgatatttgtggtgttgtacgccgtcccttggttaatactggaacttcc
aacagtaacaaaacagttgaagacgtaaccaaaagtcctggagcatccaagttggccaga
tctctttttcaatcattacaacaacagattgccaaagagactgtattatttccaaagcca
gatgatggttttctgacagatggcagtaacttctacaagcttgacaatgtccgaggagaa
tttcatgaaattcataaggattttagtactcaaagccatccacatttaaacatagatcct
ttcaagttcaatgttccatcccccgacgatgtggtttatactggcctacgttcttccaaa
acgggtttgaaagacaaagctacaaactctaattctcagctttcatcaagcaccagagag
aagaatgaactttctgtacagtcaaatgctgaaagttcagacaacttatcatccttaatg
caaaagagcagacaggatagttcaactgagagcaagctttccaaaaaagtagcaattgat
ctgcaaacaagtggtaaaacttcaaacagcttgccggaatctttgtcaaaagacaaagat
aacaatattaataaaataaattcttcgaaaaatggtacaattgatattcaatcaagcaaa
gaaaagtcaggtagtttgtctacacggtcaaaagtcaaggaaagtgataacatcagttcc
tcttctatcaaagatggaaaacctgaaagtatttccagcagtttcagcaacatggttgtc
gatgtaagatttggaaattctgataacactaatgctaaaggaactcactcacgtgtttct
tataagccagaaaaatggatgctccctgaacaagctgaagatacattgactcagctgaat
cttgcaattgttggccatgttgattctggaaaatcaactctatctggtaggttactgcac
ctattgggacggatctcccagaaagaaatgcacaaatatgaaaaggaggccaagttacag
ggcaagggatcctttgcttatgcttgggcacttgatgaaagttctgaagaaagagaacgg
ggaataactatgacagtggctgttgcttattttgacacgatgagatatcatgttgttgtg
ctcgattcccctggccataaagattttgtcccaaacatgatttctggggcaacacaagct
gatgctgcaattcttgttatagatgcctcacttggttcatttgaagctggtatggatggc
agcaaagggcaaacaagggagcatgcacaacttatcagaagctttggtgttgaccgggtt
atagttgctgtaaataagatggatgctgttgcgtactcccaagatcgatttgattttata
aggcagcagctgggagtttttctccacttttgtggtttcaaagattcttctctatcttgg
attcccatgagtgccatggaaaatcaaaatttggtggcatccccttctgatgctcgttta
aaaaactggtatggtggaccttatctattagatgcaattgactctctccaacctcctact
agagaattctcaaaacctctactaatgccaatatgtgatgtcatcaaatcaactacactt
ggacaggtttctgcctctggtaaactggaagcaggagctcttcggagtggatcaaaggtc
ttggttatgccttcagctgttgtgggaacagtacgctcattggagcgtgactctaatgct
tgtactgttgcaagagctggagataatgtagctgtaacgttgcaaggtgtggatggaaat
catgtgatggcaggagatgtactatgccatcctgactttcctgttgcagttgctaagcat
ttggagttgaaagtgttagtgttggatggtgcaagtcccatattggtgggcacacagtta
gagtttcacatacaccatgcaaaggaacctggcagagtttcaagaatattatcagtactt
gatcccaagacgggtaaggtgaccaaaaagtcacctcgctgtctctctgcaaagcaaagt
gcagtaattgaggtgattttgaatgagacagtctgtgtggtagagttctctagttgtaaa
gctcttggaagggtatccctaagatcaatgggaagaacgattgctgttggagttgtgaca
agaataattgaagaacaaggttaa
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