KEGG   Glycine soja (wild soybean): 114421743
Entry
114421743         CDS       T06057                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    114421743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114421743
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     114421743
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 MMR_HSR1 Zn_ribbon_RanBP DZR
Other DBs
NCBI-GeneID: 114421743
NCBI-ProteinID: XP_028243606
LinkDB
Position
8:9373750..9381180
AA seq 787 aa
MPRKVNYGLDYDDDYYDDDYDDYAYDDVDAEDYGGPDTKQETIKLGLWQCSICTYDNDES
MTFCDICGVVRRPLVNTGTSNSNKTVEDVTKSPGASKLARSLFQSLQQQIAKETVLFPKP
DDGFLTDGSNFYKLDNVRGEFHEIHKDFSTQSHPHLNIDPFKFNVPSPDDVVYTGLRSSK
TGLKDKATNSNSQLSSSTREKNELSVQSNAESSDNLSSLMQKSRQDSSTESKLSKKVAID
LQTSGKTSNSLPESLSKDKDNNINKINSSKNGTIDIQSSKEKSGSLSTRSKVKESDNISS
SSIKDGKPESISSSFSNMVVDVRFGNSDNTNAKGTHSRVSYKPEKWMLPEQAEDTLTQLN
LAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESSEERER
GITMTVAVAYFDTMRYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMDG
SKGQTREHAQLIRSFGVDRVIVAVNKMDAVAYSQDRFDFIRQQLGVFLHFCGFKDSSLSW
IPMSAMENQNLVASPSDARLKNWYGGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSTTL
GQVSASGKLEAGALRSGSKVLVMPSAVVGTVRSLERDSNACTVARAGDNVAVTLQGVDGN
HVMAGDVLCHPDFPVAVAKHLELKVLVLDGASPILVGTQLEFHIHHAKEPGRVSRILSVL
DPKTGKVTKKSPRCLSAKQSAVIEVILNETVCVVEFSSCKALGRVSLRSMGRTIAVGVVT
RIIEEQG
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgccccgtaaagtaaattacggactcgattacgacgacgattactatgatgatgattat
gatgactatgcttatgatgatgttgatgcagaagactatggaggacctgatacaaagcaa
gagaccattaagcttggcctttggcaatgctccatttgcacttatgacaacgatgagagt
atgactttttgtgatatttgtggtgttgtacgccgtcccttggttaatactggaacttcc
aacagtaacaaaacagttgaagacgtaaccaaaagtcctggagcatccaagttggccaga
tctctttttcaatcattacaacaacagattgccaaagagactgtattatttccaaagcca
gatgatggttttctgacagatggcagtaacttctacaagcttgacaatgtccgaggagaa
tttcatgaaattcataaggattttagtactcaaagccatccacatttaaacatagatcct
ttcaagttcaatgttccatcccccgacgatgtggtttatactggcctacgttcttccaaa
acgggtttgaaagacaaagctacaaactctaattctcagctttcatcaagcaccagagag
aagaatgaactttctgtacagtcaaatgctgaaagttcagacaacttatcatccttaatg
caaaagagcagacaggatagttcaactgagagcaagctttccaaaaaagtagcaattgat
ctgcaaacaagtggtaaaacttcaaacagcttgccggaatctttgtcaaaagacaaagat
aacaatattaataaaataaattcttcgaaaaatggtacaattgatattcaatcaagcaaa
gaaaagtcaggtagtttgtctacacggtcaaaagtcaaggaaagtgataacatcagttcc
tcttctatcaaagatggaaaacctgaaagtatttccagcagtttcagcaacatggttgtc
gatgtaagatttggaaattctgataacactaatgctaaaggaactcactcacgtgtttct
tataagccagaaaaatggatgctccctgaacaagctgaagatacattgactcagctgaat
cttgcaattgttggccatgttgattctggaaaatcaactctatctggtaggttactgcac
ctattgggacggatctcccagaaagaaatgcacaaatatgaaaaggaggccaagttacag
ggcaagggatcctttgcttatgcttgggcacttgatgaaagttctgaagaaagagaacgg
ggaataactatgacagtggctgttgcttattttgacacgatgagatatcatgttgttgtg
ctcgattcccctggccataaagattttgtcccaaacatgatttctggggcaacacaagct
gatgctgcaattcttgttatagatgcctcacttggttcatttgaagctggtatggatggc
agcaaagggcaaacaagggagcatgcacaacttatcagaagctttggtgttgaccgggtt
atagttgctgtaaataagatggatgctgttgcgtactcccaagatcgatttgattttata
aggcagcagctgggagtttttctccacttttgtggtttcaaagattcttctctatcttgg
attcccatgagtgccatggaaaatcaaaatttggtggcatccccttctgatgctcgttta
aaaaactggtatggtggaccttatctattagatgcaattgactctctccaacctcctact
agagaattctcaaaacctctactaatgccaatatgtgatgtcatcaaatcaactacactt
ggacaggtttctgcctctggtaaactggaagcaggagctcttcggagtggatcaaaggtc
ttggttatgccttcagctgttgtgggaacagtacgctcattggagcgtgactctaatgct
tgtactgttgcaagagctggagataatgtagctgtaacgttgcaaggtgtggatggaaat
catgtgatggcaggagatgtactatgccatcctgactttcctgttgcagttgctaagcat
ttggagttgaaagtgttagtgttggatggtgcaagtcccatattggtgggcacacagtta
gagtttcacatacaccatgcaaaggaacctggcagagtttcaagaatattatcagtactt
gatcccaagacgggtaaggtgaccaaaaagtcacctcgctgtctctctgcaaagcaaagt
gcagtaattgaggtgattttgaatgagacagtctgtgtggtagagttctctagttgtaaa
gctcttggaagggtatccctaagatcaatgggaagaacgattgctgttggagttgtgaca
agaataattgaagaacaaggttaa

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