Glycine soja (wild soybean): 114421812
Help
Entry
114421812 CDS
T06057
Name
(RefSeq) DNA damage-binding protein 1a-like
KO
K10610
DNA damage-binding protein 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03420
Nucleotide excision repair
gsj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114421812
09124 Replication and repair
03420 Nucleotide excision repair
114421812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114421812
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114421812
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
114421812
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114421812
TCR (transcription coupled repair) factors
Cul4-CSA complex
114421812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
114421812
NCBI-ProteinID:
XP_028243695
LinkDB
All DBs
Position
8:complement(10006257..10017193)
Genome browser
AA seq
1089 aa
AA seq
DB search
MTIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYG
RIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETGELVTRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SANAFKAIPIRPSITKAYGRVDPDGSRYLLGDHTGLVSLLVIIHEKEKVTGLKIEPLGET
SIASTISYLDNAFVYVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRDLR
NEWHAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPI
GENPNHSNLAAVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFAICSLKYNPASGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDD
NNVYYCVGTAYVLPEENEPTKGRILVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAI
NQKIQLYKWVLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKV
IKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLNRSKMDEISKAVDVSVEELCK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgactatatggaactacgtcgtcacggctcacaaacccaccaacgtcacccactcctgc
gtcggcaatttcaccagtcctcaagacctcaatctcatcatcgcgaaatgcacgcgcatc
gagattcacctgctttctccccaaggcttgcagcctatgttggatgtgccgatatatgga
agaattgcaacacttgaactcttccgccctcatggtgaagcgcaggattatctttttatt
gcaactgaaagatacaaattctgtgttcttcaatgggattccgagactggtgagcttgtt
acacgggcaatgggggatgtttctgaccggataggacgtcccacagataatggtcagatt
ggcattattgatcctgattgtaggttgattggactccacttgtatgatggtttgtttaaa
gttattcccttcgacaataaaggacagctcaaggaagcatttaatataaggcttgaggag
ctccaagttttggatatcaaatttctttatggttgttcaaagccaactattgtggttctt
taccaggataataaagatgctcgtcatgttaaaacatatgaggttgcactgaaggataaa
gattttgttgaaggtccatggtcccagaacaatctcgataatggggctgatttattgata
ccagttcccccacctctttgtggtgtgcttattattggggaagaaaccatagtgtactgc
agtgctaatgctttcaaggctatcccaatcagaccttcaattacaaaagcctatggaaga
gttgatcctgacggttctcgatatttacttggtgaccatacagggttggttagcctactt
gtaataatccatgagaaagaaaaggttacgggactcaaaattgagccccttggggagact
tccattgcatctacaatatcataccttgataatgcattcgtctacgttggttcaagttat
ggagattcacagctaataaaactaaatctacagcctgatgcaaaaggttcttatgtggaa
gtattggaaaggtatgtcaatttggggcctattgttgacttctgtgtggtagacctcgaa
aggcagggccaaggtcaggttgtaacttgctctggagcttacaaggatggttctcttcgt
gtcgttcgtaatggaatagggattaatgaacaggcatcggtagaacttcaaggtatcaaa
ggaatgtggtcactgagatcctcaacagatgatccttttgatacttttctggttgtgagt
tttataagtgaaacaagaatcttagcaatgaatcttgaggatgagctggaagaaactgag
attgagggattctgttctcaagtgcagactttattttgccatgatgcagttcataatcaa
cttgttcaagttacttcaagctctgtcagactggtcagctccacaactagagatcttcgg
aatgaatggcatgcaccatcaggctattcagtaaatgtagctacggcaaacgctacccag
gttttgttggccacaggaggagggcatttggtttaccttgaaattggagatggcatatta
caggaagtaaagcatgcccagctagagtatgagatttcatgcctggacataaatcccatt
ggtgaaaaccccaatcacagtaatctagcagcagttggaatgtggacagacataagtgtt
agaattttttctcttcctgatctgagtctcatcacaaaggaacaattaggaggggagatc
atacctcgttctgttcttctttgtgcctttgaagggatatcgtacttgctatgtgccctt
ggtgatggccatctcttaaactttatgttgaatactagtaccggtgaattaacagatagg
aaaaaggtatctctagggacacaacctataacactacggactttctcctccaaaaatact
actcatgtatttgctgcatctgatcggccaactgtaatttatagtagtaacaaaaaatta
ctttatagtaatgtgaatctgaaggaagtgagtcacatgtgtcctttcaattctgctgct
tttccagacagtttggcaattgcaaaagaaggtgagcttactattggcactattgatgat
atacaaaaacttcatattcgctctattccgctgggggagcacgcacgacgtatctgccac
caggagcaatctaggacttttgctatttgtagtttgaaatacaacccagctagtggtgaa
gactcagaaatgcactttgtccgcttgctggatgaccagacttttgagttcatatcaact
tattctcttgacacttatgagtatggttgcttcataattagctgctccttctcagatgac
aataatgtgtattactgtgttggaactgcatatgtactgccagaggaaaatgaaccaacc
aaaggaagaattcttgtttttgctgttgaagatggaaaactacagctaattgccgagaaa
gagacaaaaggagctgtttattgcttgaatgcatttaatggtaaattgcttgcagctatt
aatcaaaaaattcagctgtataagtgggtgctccgggatgatggtactcatgaattgcag
tctgaatgtggacatcacggacacatcctagcactttatgtgcaaactagaggagatttt
attgtagttggtgatctgatgaagtcaatttccttgttaatctacaagcatgaagaaggt
gctattgaggaaagagctcgtgactacaatgcaaattggatgtcagccgttgaaatcgtt
gatgatgacatatacctaggtgcagaaaacagttttaatctgttcactgttcggaaaaat
agtgaaggtgctactgatgaagagcgaggtcgtcttgaagtggttggtgagtatcaccta
ggagaatttgtcaatcggttccggcatggctcccttgttatgcgcttgccagattctgat
gtgggccagattccaactgttatctttggcaccattaatggtgttattggggtaattgcg
tctcttccacatgagcaatatgttttcttggagaaacttcagtcaaatttgaggaaggta
attaaaggcgttggagggctcagccatgagcaatggagatcatttaacaatgagaagaaa
actgttgaagccagaaactttttagatggagatttgatcgaatcatttctcgatcttaac
cgcagtaagatggatgaaatttccaaggcagtggacgtttcagtggaggagttatgcaag
agagtagaagagttgacaaggttgcactga
DBGET
integrated database retrieval system
