Glycine soja (wild soybean): 114422306
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Entry
114422306 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114422306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114422306
03009 Ribosome biogenesis [BR:
gsj03009
]
114422306
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114422306
Spliceosome [BR:
gsj03041
]
Complex A
U1 snRNP components
U1 related factors
114422306
Complex B
114422306
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Helicases
114422306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
114422306
NCBI-ProteinID:
XP_028244400
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All DBs
Position
8:15695417..15701862
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AA seq
507 aa
AA seq
DB search
MSRYDSRSGDPASYRDRRSDSGLGAPTGFGGSVQHSSSNRRDYDDGGSPKRNLSLDGLPH
FEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFHDAGFPEYVLQEITKAG
FTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILNPGDGPIVLVL
APTRELAVQIQQETTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE
SNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKF
LYNPYKVIIGSSDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCD
QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVVN
YDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTAANARFAKELIAILEEAGQKVSPELAAMG
RGAPPPPSGPRGFQDRGRGYGSSRPWS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccggcgacccagcttcctatcgtgatcggaggagtgat
tctgggctaggtgcacctacagggtttggtggttctgtacaacactcttcatcaaacagg
agggattatgatgatggtgggtcaccaaagaggaacctcagtttggatggtttacctcat
tttgagaaaaacttctacattgagtcaccagctgtaagggcaatgacagatgctgaagtt
aatgagtatcggcagcagagggaaataactgttgaagggcgagatatcccgaaacctgtc
aagacctttcacgatgctggttttccagaatatgtactgcaagaaattacaaaagctggc
tttactgaacctacacccattcaatctcaaggttggcccatggctttgaaggggcgtgat
ctgataggaattgcagaaacaggatcagggaagacacttgcttacttgttgcctgccatt
gtgcatgttaatgctcagccaatactaaatcctggagatggaccaattgtgctagttttg
gctccaactcgtgaacttgctgtccaaatacaacaagagactactaaatttggtgcatca
tctaggattaagagtacatgcatctatggtggggttcctaagggacctcaggtgcgtgat
ctccagaaaggtgtcgaaattgtaattgccactccaggaaggttaattgatatgcttgag
tcaaatcataccaacttgcagagggtcacataccttgtattggatgaagctgataggatg
ttggatatggggtttgatcctcagctacggaagattgtctctcagattcgtccagatcgt
caaactttgtattggagtgctacctggccaaaggaggttgaacaattggcaaggaagttc
ctttataacccatacaaagtaattataggctcttcagatttaaaagctaaccatgcaata
cggcaatatgttgacattgtttcggaaaagcagaaatatgataaattggtaaagttgcta
gaagacatcatggatggcagccgaatactgatatttatggataccaaaaaaggatgtgat
cagattactaggcaactccgcatggatggatggcctgcactttcaattcatggagataaa
agtcaagcagaaagagattgggtgctctcagaatttaaatcaggaaaaagtcctattatg
acggcaacagatgttgcagcccgtggtttagatgtgaaggatgtaaaatatgttgtaaat
tatgacttcccggggtcacttgaggattatgttcatcgcattgggcggacagggagggct
ggtgcaaaaggaactgcgtacacatacttcacagctgctaatgccagatttgctaaggaa
cttatagccatactcgaggaagctggacagaaagtgagtcctgaattagcagcaatgggg
cgtggtgcaccacctccaccttcaggtccccgaggtttccaagaccgcgggaggggttat
ggcagttctcgtccatggagctga
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