KEGG   Glycine soja (wild soybean): 114422757
Entry
114422757         CDS       T06057                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gsj03009]
    114422757
Ribosome biogenesis [BR:gsj03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    114422757
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 EIF3I NBCH_WD40 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_IP5PC_F Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st WDR54 Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_BBS7 WD40_MABP1-WDR62_1st Beta-prop_VPS8 WD40_RFWD3 PEP5_VPS11_N Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Nucleoporin_N Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 114422757
NCBI-ProteinID: XP_028245077
LinkDB
Position
8:22258998..22264684
AA seq 449 aa
MEVVLASSSVDGGIGCWDLHTGAEQLRYKSCTSPSHGLISVGARFIASSQLRDDPAATGY
VLYWSWSKPQVEVKSFPTEQIKPIAANHPGTYIAGGAPSGDIYLWEVETGRLLKKWRAHF
RAVSCLVFSEDDSLLVSGSEDGSVRVWSLFMIFDDLRCQQASNLYEYSFSEHTLTVTDVV
IGNGGCNAIIVSASNDRTCKVWSLSRGMLLRNIVFPSIINCIALDPAEHVFYAGSEDGKI
FIAALNTESITTNNYGMHIIGSFSNHSNQVTCLAYGTSENLLITGSEDGMVRVWNARTRN
IVRMFKHAKGPVNNILVVRRENDSSNHISSNVQASSRKQGSNLPPPLEKYANSIDDDLDM
KTMISLGGGRRFVDPSYLSSHVISNYIKELQHQGSAAASEMEMEKLKHDYQKSVQMANQL
KKMNENLHQFCVKELLDGGQARTLDEDQN
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggaggttgttttggcgtcgtcgtccgtcgacggcggaatagggtgctgggaccttcac
accggcgcggagcagctccgctacaaatcttgcacctccccttctcacggactcatctcc
gtcggtgctcgcttcatcgcttcgtcgcagcttcgtgatgatcccgcagccactggctat
gttctctactggtcctggtctaagcctcaagttgaagtgaagagttttcctactgaacaa
atcaaacctattgctgctaatcatccgggaacctatatagccggtggagctccatctggt
gacatttacttgtgggaggttgaaactggtaggctgcttaagaagtggcgtgctcatttt
agggcggtttcttgcctggtgttttccgaagatgactcgctgctggtatctggttctgaa
gatggatccgtaagagtttggtctctcttcatgatatttgatgatttgcgatgtcagcaa
gcaagtaatctttacgagtatagtttttcagagcacaccctgactgtgactgatgttgtt
attggtaatggagggtgcaatgcgattatcgtgtcagcttcaaatgatcggacttgtaag
gtatggagcttatctaggggaatgctactaagaaatatagtattcccttcaataattaat
tgcattgcattggatccagccgaacatgtcttttatgctggcagtgaagatggaaagata
tttatcgcagcacttaacactgaaagcatcaccaccaataattatgggatgcatatcatc
ggttctttttctaaccacagcaatcaagttacttgcttagcatatggcacaagtgagaat
ttgttaataactgggtcagaggatggaatggttcgtgtttggaatgcgagaactcgtaac
attgttcgcatgtttaaacatgctaaaggacctgtaaataatattctggttgttagacga
gaaaatgactccagtaatcacatatcttctaatgtacaagcatcatcaagaaagcagggg
tctaatttaccccctccattggaaaaatatgcaaattcaattgatgacgacttagatatg
aagactatgatcagccttgggggtggtaggagattcgtggatccttcatacctcagctct
catgtgatatctaattacattaaggaacttcagcatcaaggttcagctgctgcttctgaa
atggagatggagaaactaaaacatgattaccaaaagtcagtgcaaatggctaaccagttg
aagaaaatgaatgaaaacttgcatcaattctgtgtaaaggagctgttggatggtggtcaa
gctagaaccttagatgaagatcagaattaa

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