Glycine soja (wild soybean): 114422887
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Entry
114422887 CDS
T06057
Name
(RefSeq) ubiquitin receptor RAD23c-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03420
Nucleotide excision repair
gsj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114422887
09124 Replication and repair
03420 Nucleotide excision repair
114422887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gsj03051
]
114422887
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114422887
Proteasome [BR:
gsj03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
114422887
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
114422887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
UBA_7
Dsc3_N
CUE
Rad60-SLD_2
Ubiquitin_2
TECR_N
NQRA_N
Motif
Other DBs
NCBI-GeneID:
114422887
NCBI-ProteinID:
XP_028245244
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Position
8:28342398..28353008
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AA seq
469 aa
AA seq
DB search
MKVFVKTLKGTHFEIEVNPSDTLSEVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLE
ENKVAESSFIVIMLSKTKSSSGEGSTTSTAPSAKREQEQQHGTPAAPRERDAAHRTSTCT
TTANSAPSTMLATRHPAPAHHTHDERTVTVAAAATATVCDGKPSATPTSTSVSTAPQAPA
STGASATPVTAPTAAPAPAPAPAAPAPAPAPIFSGSSVRPESDIYGQAASNLVAGSNLEG
TIQQILDMGGGSWDRDTVVRTLRAAYNNPERAVEYLYSGIPEQAEAPPVTGVPASAQPSN
PPADTPQAAQPASVPSSGPNANPLDLFPQGLPNVGSGAAGAGSLDFLRNSQQFQALRAMV
QANPQILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQLAGAMPQAVT
VTPEERQAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMHEFDE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttcgtgaagactctcaagggcacgcacttcgaaattgaagtgaacccttcg
gacacgctttctgaagtgaagaaaaatatagaaactgttcagggtgcagatgtctatcct
gctgcacagcaaatgcttattcatcaaggaaaagttctaaaagatggtactactttggag
gaaaataaagtagctgaaagtagttttattgtaattatgctatcaaagactaagagttca
tctggtgaaggatctactacttcaactgcaccttcagctaagcgcgagcaggaacagcaa
catggaactccagcggcaccacgcgaacgcgacgcagcacaccgcaccagcacctgcacc
acgacggcaaactcagcacccagcaccatgctcgcgacacggcaccccgcaccagcgcac
cacacacacgacgaacggacggtgacggtggcggcggcggcaacggctacagtctgtgac
ggcaagccaagtgcaactcctacttcaacttctgtgtctactgcacctcaagctcctgct
tcaactggagcatcggctacacctgttactgccccaacagctgctcctgcacctgcacct
gcaccagctgctccagctccagctcctgctcctatattttcaggctcttctgtcaggcca
gagtctgatatatatgggcaggcagcatccaatcttgttgctggaagtaacttggaggga
acaattcagcaaatccttgacatgggtggaggaagctgggacagggatactgttgttcgc
acccttcgtgctgcttataacaaccccgagagagctgttgaatatttgtattctggcata
ccagagcaagccgaagctccaccagttaccggagtgcctgcaagtgctcaaccttcaaat
cctccagctgatactccacaggcagcacaaccagcatctgttccttctagtggacctaat
gctaatcctttagacctctttccccagggccttcctaatgttgggtctggtgctgctggt
gctggttccttagactttcttcgcaacagtcaacagttccaagccttacgcgctatggta
caggctaatccacaaatattgcagcctatgctacaagagcttggcaaacaaaatcctcat
cttatgcgattgattcaagagcatcaagttgacttccttcgcctaattaatgaacctgtt
gaagggggtgagggaaatatactgggacagctggctggtgccatgccgcaagcagtgact
gtcacccctgaggagcggcaagcaattgagcgtctcgaagcaatgggttttgatcgtgca
actgtattggaggtgtactttgcttgtaacaaaaatgaggagctggctgccaactacctt
ttagatcacatgcatgagtttgatgaataa
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