Glycine soja (wild soybean): 114423346
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Entry
114423346 CDS
T06057
Name
(RefSeq) protein VACUOLELESS1-like
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114423346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114423346
Membrane trafficking [BR:
gsj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114423346
Hops complex
114423346
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
114423346
NCBI-ProteinID:
XP_028245871
LinkDB
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Position
8:complement(42915995..42924766)
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AA seq
843 aa
AA seq
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MANVSVAAEWQLLYNRYYRKPELYPMPWKHVDLARTKVAAAPFGGPVAVIRDDSKIVQLH
AESALRKLRLFSSSGRPLADAVWRHPGGRLVGMSWTDDQTLLCVVQDGTVYRYDVHANLI
EPNLSLGKECFEDNVADCAFWGHGLVCITEANQLFCIADFRNPSAVKLADPGIDEMPHCM
AVIEPQYTVSGNVEVLLGVDDAVVLAVEEDGVQRLGEGLLRGPLQKMVVSRDGKWLASFT
HDGRLLVTTSDLTGVIIERDCESALPPQQIAWCGMDAVLLYWDDMLLMMGPEGEPVHYLF
DEPIILIPECDGVRILSNTSMEFLQRVPDSTVSIFTIGSTSPAALLYDALDHFDRRSAKA
DENLRLIRSSLPEAVEACVDAAGHEFDVSRQQTLLRAASYGQAFCSNFQRDRIQEMCKIL
RVLNAVRSPEIGIPLSIQQYKLLTPSVLIGRLINAHQHLLALKVSEYLGMNQEVVIMHWA
CSKITASLAIPDVTLLEILLDKLKLCKGISYAAVAAHADKNDRRKLAALLVEHEPRSSKQ
VPLLLSIGEEDIALIKATECGDTDLVYLVLFHIWQKRQPLEFFGTIQARPLARDLFVTYA
RIYKHEFLKDFFLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKLIEKAHGLFA
ETKEHTFESKAAEEHAKLLRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNNRAAMKVKT
EFKVSEKRWYWLKVFALATIKDWVALEKFSKEKKPPIGYRPFVEACIEADEKGEAIKYIP
KLADPRERAESYARIGMAKEAADAASQAKDGELLGRLKLTFAQNAAASSIFDTLRDRLSF
QGA
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgtctccgtcgcggcggagtggcagctcctctacaaccgctactaccgcaag
ccagagctctaccctatgccgtggaagcacgtggacctcgcccggaccaaggtcgccgcc
gcgcccttcggcggccccgtcgccgtcatccgcgatgactcaaagatcgtccagctccac
gccgagtccgctctccgcaagctccgcctcttctcctcctccggccgccccctcgccgac
gccgtatggcgccaccccggcggccgcctcgtcggcatgtcctggaccgacgatcaaact
cttctctgcgtcgtccaggacggcaccgtttaccgctacgacgtccacgcgaacctaatc
gaaccaaacctctccctcgggaaagagtgcttcgaagacaacgttgcggattgcgcgttt
tgggggcacggtttggtctgcatcaccgaggcgaatcagttgttctgtattgctgatttc
aggaaccctagcgcggtgaagctcgcggatcccgggatcgacgagatgccgcattgtatg
gccgtgattgagccgcagtacacggtttcggggaatgtcgaggttctgctcggcgtggat
gatgctgtggtgctcgctgtggaggaggatggcgtgcagaggcttggagagggattgttg
cgggggccgctgcagaagatggtggtttcgcgcgacggcaagtggctcgcttcgtttacc
catgatgggaggctcttggtgacgacttcggacttgactggagttatcatcgagagggat
tgcgagtcagctcttcctccgcagcagattgcttggtgtggaatggatgctgtgctgctg
tactgggatgatatgcttttaatgatgggtcctgagggagagccagttcactaccttttt
gatgaaccaataattcttatacctgagtgtgatggagtgaggatattgtccaatactagt
atggaatttctacagcgggtgcctgattccaccgtttcgatcttcacaattggaagtaca
tcacctgctgctttactatatgatgccttggatcattttgataggcgaagtgccaaggca
gatgaaaatttgagattgataagatcatcccttcctgaggctgttgaagcatgtgttgat
gctgcaggtcatgaatttgatgtttcacgccagcaaactctcctaagggcagccagttat
gggcaagccttttgtagcaattttcaacgtgatcgtatccaagagatgtgtaaaattctg
cgggtcttgaatgcagtgcgcagccctgagattggcattcctcttagtattcagcaatac
aagttgcttacaccatctgttctgattggtcgcctgattaatgctcaccaacatctgctt
gcactgaaagtatcagaatatcttggaatgaatcaagaggtggtgataatgcactgggca
tgttcaaagataactgcttcactggcaattcctgatgtgactcttctggagattctgctg
gataagttaaaactgtgcaaaggcatttcctatgcagcagttgctgctcatgcagacaaa
aatgaccgacgaaagttagctgccttgcttgttgaacacgagcctcgttcatcgaaacag
gttcctctcctgttaagcattggagaagaagatatagccttgataaaggcgaccgaatgc
ggtgatacagatcttgtttaccttgtactttttcatatttggcaaaagaggcaaccattg
gagttctttggcactatacaggcgagaccattggcacgggacttatttgtaacttatgca
cggatttataaacacgaatttttgaaggatttcttcttatcaactgggcaacttcaagat
gtggcatttcttttgtggaaagaatcatgggaacttgggaaaaatcccatggcaagcaaa
ggatctccacttcatggtcctcgaataaaacttattgagaaggcacatggtctttttgct
gaaaccaaggagcatacctttgaatcaaaggcagctgaagagcatgcaaaactgttaaga
attcagcatgaacttgaagtgactacaaagcaagccatttttgtggattctagtataagt
gatacaatccgtacttgtattgtcttgggaaataatcgagctgcaatgaaagtgaaaacg
gaatttaaggtgtctgagaagagatggtattggcttaaagtttttgcattagctacaatc
aaggattgggttgccctagagaaattttcaaaggagaagaaacctccaattggttatagg
ccatttgtggaggcatgcattgaagcagacgaaaagggagaagctattaaatatatccca
aaacttgcagaccctcgagaaagagctgagtcatatgctcgaattggtatggccaaggaa
gctgccgatgctgcttcacaggcaaaagatggtgaattacttggtcggttgaaattgact
tttgcacaaaatgcagcagcttcatcaatatttgatactcttcgagatcggttgtctttc
caaggtgcttaa
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