Glycine soja (wild soybean): 114423544
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Entry
114423544 CDS
T06057
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114423544
Enzymes [BR:
gsj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
114423544
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
114423544
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
114423544
NCBI-ProteinID:
XP_028246147
LinkDB
All DBs
Position
8:complement(45157056..45163868)
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AA seq
614 aa
AA seq
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MAPARKKPSKPSKSPKNPRKTHPKHDSTSESEEDTPPQLQPEQLELGDDNSDSASELSSD
GDDPLADDFLQGTDDDEEKGSGSESGLESGSDSDSDDGDIEKKSRAIDEEKAKEEEDADA
EMQLNINQESDEFRLPTKEELDEEALRPPDLSNLQRRTKEIVRVLSNFKALRQDGSTRKE
YVEQLKKDLCTYYGYNEFLISALVEMFPVVELMELIEAFEKPRPICLRTNTLKTRRRDLA
DVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEK
ERVVDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTANLHRMGVSNTVVCNYDGK
ELPKVLGVNAVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCAHLQKELILAAIDMVD
ANSKSGGYVVYSTCSIMVAENESVIDYALKKRDVKLVPCGLDFGRPGFTKFREQRFHPSL
EKTRRFYPHVQNMDGFFVAKLKKMSSSKPGAISSETAEKEDTTSFVEEKEKSSDGIKENG
NVSSESEKGKKRKFPSKPSNGLKSNGKASSESEPKKRNKRQFPSKEEISKAREDKRNALR
EKRRKGGKQQKNKK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcaaggaagaaaccttctaagccaagcaaatcgccgaagaaccctaggaag
acccatcccaagcacgattctacctccgaatccgaagaagacacgccgccgcaactgcaa
ccggagcaactcgaactcggtgacgacaactccgattccgcgtcggagctctcctccgat
ggagacgatccgttagccgacgatttcctccaaggaaccgatgacgacgaagaaaaaggc
tcaggttcggagtcaggtttggagtcaggttcggattccgattcggatgatggtgatatt
gaaaagaagtcgagagctattgacgaagagaaggcgaaagaggaagaggacgcggatgcc
gaaatgcagctcaacatcaaccaagagtctgatgagttcagattgcctaccaaagaggag
cttgatgaggaggctctccgcccacctgatctttccaatctccagaggagaaccaaagag
attgttcgtgttctttcaaattttaaggctttgaggcaagacgggtcaacgagaaaagag
tatgttgaacagcttaagaaagatttatgtacctactatggctacaatgagttcctaatt
agtgctctagtggagatgtttccagttgttgaacttatggaactgattgaagcctttgaa
aagccacgtcctatatgtctgaggactaatacattgaagacacgcagacgggatttggcg
gatgttttgataaataggggagtaaatttggatcctctaagcaaatggtcaaaggttgga
cttgttgtgtatgattctcaagtgcctattggtgccactcctgagtatatggctggtttc
tacatgctacaaagtgcaagctcttttctgcccgttatggctttggctcctcaagagaag
gaacgagttgttgatatggcagctgcacctggtggtaaaacaacttacattgctgctcta
atgaagaatactggaataatttttgcaaatgaaatgaaggtaccacgacttaagtcactg
actgcaaatttacatcgcatgggtgtatctaacactgtagtttgtaactatgatggaaag
gagcttccaaaggttttaggtgtaaatgctgttgatagagtattattggatgccccttgc
agtggaactggggttatttccaaagatgagtctgttaaaacctctaaaagtctggaagat
atacagaaatgtgcgcatctacagaaggagctcattcttgcagcaattgacatggtggat
gctaattcaaagtctgggggatatgttgtttattctacatgctcaattatggttgccgag
aatgagtcagttattgactatgcactcaaaaagcgggatgttaaattggttccttgtgga
cttgattttgggcgtccaggatttacaaagtttagggaacaacgttttcacccttcttta
gaaaagacaaggcgtttctatcctcacgtacagaatatggatggtttttttgttgcaaag
ttgaaaaaaatgagcagctcaaagcctggtgcaatatcatcagaaacagccgagaaagaa
gacactacctcgttcgtggaggaaaaggagaaatcaagtgatggcataaaagaaaatggc
aatgtatcttctgaatccgaaaaggggaagaaaagaaagttcccctcaaaaccaagtaac
ggtctaaaatcaaatggcaaagcatcttcagaatctgaacccaaaaagaggaataaaagg
caatttccatctaaggaagagatttcaaaagccagggaggataagagaaatgctttaaga
gaaaaaaggagaaaaggtggcaaacaacagaagaacaaaaaatga
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