Glycine soja (wild soybean): 114423776
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Entry
114423776 CDS
T06057
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114423776
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114423776
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
ColG_sub
Motif
Other DBs
NCBI-GeneID:
114423776
NCBI-ProteinID:
XP_028246457
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Position
8:47197297..47203902
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AA seq
451 aa
AA seq
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MKLLSPKLFTLAILLAAALVLASADAVSDNEMQKHEATESRDVVEEKLRVQSLKNSSMAE
RSGGALNEHAVDNPEEIASMVDESIRNYTARRNLNFFSCGTGNPIDDCWRCDKRWYARRK
RLANCGIGFGRNAIGGRDGRYYVVSDPNDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVI
TLKQELIMNSFKTIDGRGVNVHIAYGACITIQFVTNVIIHGLHIHDCKVTGNAMVRSSPS
HYGWRTLADGDGISIFGSSHIWIDHNSLSSCADGLVDAVMGSTAITISNNYFTHHNEVML
LGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPT
INSQGNRYLAPLNPFAKEVTKRVDTGSSVWKSWNWRSEGDLLLNGAFFTSSGAGAAASYA
RASSLGAKSSSLVGTITSGAGVLKCRRGVMC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctctctccaaaattgttcactctcgccattctgctcgcggcggcgctggtt
ttagcttccgccgacgcagtcagtgacaatgagatgcagaaacatgaagccacggaatca
agggacgtggttgaagagaagttgcgagtgcagagcttgaagaattcgtcaatggcagaa
aggtcagggggtgctttaaatgaacatgcagttgataatccagaggagattgcttccatg
gttgatgagagcatacgcaattacacagctcgaaggaacctgaacttcttctcatgcggg
accgggaacccaatcgacgactgctggcggtgcgacaagcggtggtacgcccgccgcaag
cgcctagccaactgcggcatcggcttcggccgcaacgccatcggtggccgcgacgggcgg
tactacgtggtgtcggaccctaacgacgacgacccagtaaaccccaaacccggtaccctc
cgccacgccgtgatccaggaccgccccctctggatcgtgttcaagcgcgacatggtcata
accctaaagcaagaactcatcatgaacagcttcaagaccatcgacggccgtggcgtgaac
gtccacatcgcttacggtgcgtgcatcaccatacagttcgtcaccaacgtgatcatccac
gggttgcatattcacgactgcaaggtaactggtaacgcaatggttcggagctctccctcg
cattatgggtggaggactcttgctgatggcgatgggatctccatctttggctcgagtcac
atttggattgatcataactcgctgtcgagttgcgctgatgggcttgtggatgctgttatg
gggtccactgctattactatttccaacaactacttcactcaccacaacgaggttatgcta
ctgggtcacagtgactcttatgtccgtgacaagcaaatgcaagtaaccattgcttacaac
cattttggggagggtcttatccaaagaatgcccaggtgcagacatgggtatttccacgtg
gttaacaatgactatacccactgggtaatgtatgcaattggaggcagtgctaatcccaca
attaacagccagggtaacagatacctcgctcctctgaacccttttgctaaagaggtgaca
aagagagtggatacagggtcatccgtatggaaaagttggaattggagatctgaaggggac
cttttgctcaatggagccttttttacttcatcaggagcaggagctgcagcaagctatgct
agagcctcaagtttgggggctaaatcatcttctttggttggtaccatcacatctggagct
ggtgttcttaaatgccgcaggggtgtcatgtgttaa
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