Glycine soja (wild soybean): 114423793
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Entry
114423793 CDS
T06057
Name
(RefSeq) WD repeat-containing protein 36-like
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114423793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114423793
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114423793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_EIPR1
NBCH_WD40
WD40_RFWD3
Beta-prop_VPS8
WD40_like
Beta-prop_DCAF12
Beta-prop_SCAP
Nbas_N
Beta-prop_IP5PC_F
WDCP
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
114423793
NCBI-ProteinID:
XP_028246477
LinkDB
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Position
8:47412419..47421215
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AA seq
907 aa
AA seq
DB search
MGIFEPYRAIGCITSSVPFSVQRLGTETFLTVSVGKAFQVFNCAKLNLVLVGPQLPKKIS
ALASYREYTFAAYGNNIAVFKRAHQVATWSSHNAKVKLLLLFGDHIVSVDARGNMFLWPF
KGIDENLFPFGHIMLDEKFSPSCIMHPDTYLNKVLVGSEQGPMQLWNISTKKKIFEFKGW
NSPISCCVSSPALDVVAIGCTDGRIHVHNIRYDEELVTFTHSTRGSVTALSFSTDGQPLL
ASGGSSGVISIWNLEKKRLQSVVREAHDSVITSLHFFANEPVLMSSSADNSIKMWIFDTS
DGDPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQRHVSKR
AKKLKLKEEEIKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILNPC
PENPTPVKACAISACGNFVFLGTAGGWIERFNLQSGIRRGAYIDISESRNCAHDGEVVGV
ACDSTNTLMISAGYKGDIKVWNFKERDLKTRWDVDCSIVKIVYHRYNGLLATVADDLTIQ
LFDVVALRLVRKFEGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDVILARQIDAIHVDVP
ITALSLSPNMDILATAHVDQSGIYLWVNQAMFSSTSNVDSYASGKEVVSVKLPSISSAEH
SRDEHYDEPMNASQPKDALYFSTQDKQIPELVTLSLLPKSQWLNLINLDIIKVRNKPIEP
PKKPEKAPFFLPSVPSLSGEILFESGKLSLKENDGTDDGKQMKTRLDMPQSRFLYLLQCS
KETDNYAAFTDYIKGLSPSTLDMELRMFQIIDDDDDQQEAEKRPELVSIEWLLDYFIHEL
SCRNNFEFLQAVIRLFLKIHGETIRQQSCLQEKARKLLDIQCMVWQRVDKLFQSSRCVIA
FLSNSQI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggtatatttgaaccttacagagcaattggatgcatcacaagcagcgtccccttctct
gttcaaaggctcggcaccgaaactttccttaccgtcagcgttggaaaggcttttcaggtt
tttaactgtgcaaagctcaatttggttctcgttggtcctcaactgccgaagaagattagt
gctcttgcttcctatcgcgaatacacttttgctgcatatggaaacaacattgctgttttc
aagcgtgcacaccaggttgcaacttggagcagccataatgctaaggttaagttgcttctg
ttgtttggagatcatattgtcagtgttgatgctcgcggcaacatgttcttgtggccattt
aagggaattgatgagaacctttttccatttgggcacattatgctggatgagaaatttagc
cccagctgtataatgcatccggatacttacctaaataaggttcttgttgggagtgagcaa
ggtcctatgcagctttggaacattagcacaaagaaaaagatttttgagttcaagggatgg
aattcacctatctcctgttgtgtttcatcccctgccttagatgttgttgcaattggctgt
acagatggaaggattcatgttcacaacattcgttatgatgaagagttagttacatttaca
cattccacacgtggttcagtgactgccttatcttttagcactgatggacagcctcttcta
gcttcgggaggttcatctggtgttataagcatatggaatctggaaaagaaaaggctccaa
tcagttgtaagagaggctcatgatagtgtgatcacatccctacatttttttgctaatgaa
ccagtgctaatgagttcatcagcagacaactcgattaaaatgtggatttttgatacaagt
gatggtgatcctcgccttttgcgcttccgaagtgggcatagtgctcctcccctttgcata
aagttttatgccaatggaagacatattctttctgcaggtcaggatcgtgcctttcgcctt
ttctctgtagttcaggatcaacaaagcagggagctttctcaacggcatgtttctaaacgt
gctaagaaattgaaattgaaggaggaagaaataaaattgaagcctgtgattgcatttgat
tgtgctgaaattagagaacgtgattggtgcaatgtggtcacttgtcatatggatactgcc
caggcatatgtttggagacttcaaaattttgttcttggtgagcatatcttgaatccatgc
cctgaaaatccaacacctgtaaaggcttgtgctatcagtgcctgtggaaattttgtcttt
ctagggacagcaggtggatggattgaaaggtttaatcttcaatctggaattcgcaggggt
gcttatattgacatttcagaatcaagaaattgtgctcatgatggtgaagtagttggagtt
gcttgtgactcaacaaatactctcatgataagtgcaggatacaaaggagatataaaggtt
tggaatttcaaagaacgtgatcttaaaaccagatgggatgttgattgttctattgttaag
attgtttaccatcgttataatggtctcctggctacagtagcagatgatttaacaattcaa
ttatttgatgtcgtggctcttagacttgttcgtaaattcgaaggtcacacagatcgtata
acagatttgtgcttcagtgaggatgggaagtggctcctgtcatctagtatggatggaagt
cttagaatttgggatgtaatcttagcaagacagatagatgcaatacatgttgatgtacct
atcacggcattatccctgtccccaaacatggatatattagcaactgcccatgttgatcaa
agtggaatatacctgtgggtaaaccaggcaatgttctctagtacttcaaatgtcgattca
tacgcaagtggaaaagaggttgtgagtgtcaaattgccgtctatctcttctgcagaacat
tctcgagatgagcattatgatgagccaatgaatgcatctcaacctaaagatgctctgtat
ttctcaactcaagataagcaaatacctgaattagttacactttcattgctgcctaagagc
cagtggctgaacttaatcaacttggacattataaaggttcgcaataagcctattgagcct
ccaaaaaaacctgaaaaagctccattcttcttgccttcagttccatccctctctggggaa
atattgttcgagtctggtaagttatcattaaaggagaatgatggaacagatgatggaaaa
caaatgaagacaagattagatatgccacaatcacgttttctgtatcttctccaatgttca
aaagagacagacaattatgcagcatttactgattatattaaaggattatctccgtcaact
ctggatatggagcttcgaatgtttcagatcattgatgatgatgatgatcagcaagaagca
gagaagagacctgagttggtatccattgaatggcttctggattattttattcatgagctt
tcctgcagaaataattttgagtttctacaagctgtcatcaggctatttttgaagatccat
ggtgagacaattcgtcagcagtcatgcttacaagaaaaggcaaggaagcttctagatatt
caatgcatggtatggcagagagtagataaattatttcaaagttcgaggtgtgtgattgcc
tttcttagtaattcccaaatttag
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