Glycine soja (wild soybean): 114424946
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Entry
114424946 CDS
T06057
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03030
DNA replication
gsj03420
Nucleotide excision repair
gsj03430
Mismatch repair
gsj03440
Homologous recombination
gsj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114424946
03420 Nucleotide excision repair
114424946
03430 Mismatch repair
114424946
03440 Homologous recombination
114424946
03460 Fanconi anemia pathway
114424946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsj03000
]
114424946
03032 DNA replication proteins [BR:
gsj03032
]
114424946
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114424946
Transcription factors [BR:
gsj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114424946
DNA replication proteins [BR:
gsj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114424946
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114424946
MMR (mismatch excision repair)
114424946
DSBR (double strand breaks repair)
HR (homologous recombination)
114424946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
DUF223
DUF936
zf-CCHC_5
zf-CCHC_2
CDC24_OB3
zf-CCHC_3
eIF-4B
Motif
Other DBs
NCBI-GeneID:
114424946
NCBI-ProteinID:
XP_028247440
LinkDB
All DBs
Position
9:complement(42089189..42092936)
Genome browser
AA seq
894 aa
AA seq
DB search
MAVSLTQSAIMEMCSANCPEGLQPVLQVIELKLVQSQQNSNVERYRLVLSDGSHYQQGML
ATQKNDLVHAGKLQKGSVVRLTQFICNVVQSRKIIIIVDLDVVLDKCELIGEPVPAPKDA
PTESATGQSGVTSGNPQLLNSSSHTGGMPARPNVASPSPDHPKVNPSASGVYSSNAPPTY
PKVEHGVSRSAPFSGSSGGQNTGFRNPQFEASRPLQNSYARPPQQPMYRQPSPMYTNRAP
MGRNEAAPRIIPIAALNPYQSMWTIKARVTFKGELRHYTNARGDGKVFSFDLLDSDGGEI
RATCFNAVADQFYNVIEAGKVYLISRGSIKPAQKNFNHLRNDQELTLDVASIIQPCLDDN
DSIPSQTFNYRPISEIESLENNSIVDVIGVVTSISPTASIMRKNGTEVQKRTLQLKDMSG
RSVELTLWGNFCIVEGQRLQTICDAGEFPVLATKAVRVNDFNGKSVGTIATSQLYVEPDF
PEACTLKRWFENEGKSVPTLSISREISNLGKTDVRKTISQIKDEKLGTSEKPDWISVFAA
VSHIKVDNFCYPGCPLKIGDRQCNKKVTNNADGTWHCERCNQSIDTCDFRYLLSMQIQDH
TGITWVTAFQESGEEIMGIPAKDLYYMKYEEQDDDKFSEIFHKVLFTEYMFKLRIKEEFY
SDEQRIKSTIVKAEKVNFASKSRVNLELIFNELRAEKSKGITIPNSVTNNTRLGSVETGQ
VTPPAYYKSNANTSRDFGMPANQVGQQHGNQYSNISSAGAAPGSYTSCTNCGVSGHSSAL
CPNIRNVPGHSAGGGFANRASAGLGGGGGASVECYKCHQSGHYARDCPGFSAAPPSSYGS
NSGGGGSGECFKCHQTGHWARDCPGLSAAPSSYGSANAMQGRYGVAQKQQFGGY
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccctgacgcagagtgcgataatggagatgtgcagtgcgaattgccccgag
ggcttgcaaccggtgctgcaggtgatcgagttgaagctggtgcagtcgcagcaaaacagc
aacgtcgagaggtaccgtttggttctctccgacggttcacattaccagcaagggatgctc
gccacgcagaagaacgacttggttcatgctggaaagttacagaaaggttccgttgttaga
ctcactcagttcatctgcaacgttgtccagagccgcaagattattatcatcgttgaccta
gatgttgtactggacaaatgtgagctgattggagaacctgtccctgcaccaaaagatgca
cctacagaatctgcaactggtcaatcaggagtcacatctgggaatccacaacttttgaat
agcagttcacacactggtggcatgcctgctagaccaaatgtggcttcaccatctccagat
catccaaaagtaaatccttctgccagtggtgtttattctagtaatgcccctcctacttat
cctaaagtagagcatggagttagtagatcagcaccattcagtgggtcttctggtggtcag
aacacaggtttccgcaatccccaatttgaggcgtcaaggcccttgcaaaactcatatgct
cgtccacctcagcagcctatgtaccgtcagccatctccaatgtacactaacagagcgcca
atgggaagaaatgaagctgcccccaggataattccaatagcagcattgaatccataccag
agtatgtggactattaaagccagggtaacatttaagggagaactcaggcactataccaat
gctcgaggtgatggcaaggtgttttcttttgatcttctggattctgatggcggagaaatt
cgggcaacttgcttcaatgctgtggctgatcagttctacaatgttattgaagctggtaag
gtatatctaatttccaggggaagcataaagccagctcagaagaattttaatcaccttcgc
aatgatcaagagctgacccttgatgtggcatcaattatacagccatgccttgatgataat
gactcaattccatcacagacatttaattatcgccccattagtgaaattgaaagtttggaa
aacaacagcattgtggatgtgattggtgtggtgacttctattagtcctacagcttcaatc
atgagaaaaaatggcactgaagttcagaagagaactctccagttgaaagacatgtcaggc
cgaagtgttgagttaactctatggggaaatttttgcattgtagaaggacaaaggttgcaa
actatttgtgatgctggggaatttccagttttggctacaaaagctgtcagagtaaatgat
ttcaatgggaagtctgtcgggactatagccactagtcagctatatgtggagcctgatttt
cctgaggcttgtacactgaaaagatggtttgaaaatgaagggaagagtgtcccaactctc
tctatttccagagaaatatctaatctgggtaagactgatgtgcggaagactatatctcaa
attaaagatgagaagttagggacttcagagaagcctgattggatatctgtctttgcagct
gtttcacacattaaggttgataacttctgttacccagggtgccctctcaagataggggat
agacaatgtaacaaaaaggtgactaataacgcagatgggacatggcattgtgaaagatgt
aatcagtctattgacacatgtgactttaggtacttactgtcaatgcagatacaggatcac
actggcataacatgggttactgctttccaggagagtggtgaggagataatgggtatacct
gcaaaagatttgtattatatgaagtatgaagagcaagatgatgataagttttctgaaatc
ttccacaaggttctcttcaccgagtacatgttcaagttaagaataaaagaggaattctac
agtgatgaacaacgtattaagtcaacgatagtaaaagcagaaaaggtaaactttgcttct
aaatctagagttaatttggagttgatttttaacgaactcagggctgagaaatcgaaaggt
atcaccattcccaactctgtaaccaataatactagactggggagcgttgaaactggacaa
gttacaccaccagcttattataagagcaatgctaataccagtagagattttgggatgccg
gcaaatcaagtgggtcaacagcatggaaaccaatatagcaatatttcttctgcaggtgct
gctcctggttcatatacatcatgcaccaactgtggagtctctggtcatagctctgcactt
tgcccaaatattagaaatgtacctggacattctgcaggagggggctttgccaacagggca
tctgcgggattaggtggtggtggtggagcttctgtcgaatgctataaatgtcatcaaagt
ggtcattatgcaagagattgtcctggtttcagtgcagcacctccatcatcatatgggagc
aattcaggtggtggtggttctggcgaatgctttaaatgccatcaaactggccactgggca
agagactgtcctggtctcagtgcagcaccttcatcatatggaagcgctaatgcaatgcag
ggaagatatggggttgctcaaaagcaacaatttggaggatattga
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