Glycine soja (wild soybean): 114424957
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Entry
114424957 CDS
T06057
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114424957
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gsj01001
]
114424957
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114424957
03036 Chromosome and associated proteins [BR:
gsj03036
]
114424957
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
114424957
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
114424957
Protein kinases [BR:
gsj01001
]
Serine/threonine kinases: Other
TAF1 family
114424957
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114424957
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
114424957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
ubiquitin
Rad60-SLD
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
114424957
NCBI-ProteinID:
XP_028247453
LinkDB
All DBs
Position
9:42181442..42209155
Genome browser
AA seq
1890 aa
AA seq
DB search
MGYDSDSPSQDGRDEDDEEEYEDSGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL
ADKLGPSLTDIDLSGKSPQTPPDVVEQDCDVKAEDAVDYEDIDEEYDGPETEAANEEDYL
LPKKEFFSSEASVCLESKASVFDDENYDEESEKEQDFVNDDSKVYNIPLAGEQEESFVDA
SKEESSLEHELHVDSPQTEELDADVQKLEEDGPEVQKRSMAMPLPVLCVEDGVAILRFSE
IFGIHEPLRKGEKREHRHSIPRDRYKSFDLTDDFVEEDEEEFLKGFSQSLSLSKQVCVVH
NDVSESNDVDLEFPKFGFLHADASVDRKDDQQSKDSCHSAEPMKGDFVEDHFWKDHPFML
ANFYPLDQQDWEDKILWGNSPVPSYNNVESCEISGPELGASGGSEIEIESGIHNIQMEPQ
KVLEDKNHNVLMRSSPVKLEPFGSRDSSGAKTNLISRSLFHPQLLRLESRSEVDSSSLAD
GRDAEISEHNQSGQVKRFTKVISQNRDMMEGSWLDKIIWEELDQPTVKPKLIFDLQDDQM
HFEVLDTKDGTHLCLHAGAMILTHSLKLSSGDSSELPGHGSQYGWRYVANDKHYSNRKTS
QQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDNEVAVKEQ
GKLPTQGPMKIIIKSLGGKGSKLHVDVEETLSSVKAKASKKLDFKVSETVKTFYLGRELE
DHKSLAAQNVQPNSLLHLVRTKIHLWPKAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFL
MEYCEERPLLLSNVGMGARLCTYYQKCSPDDQSGSLLRNTDSRLGHIISLDPADKFPFLG
DLKPGCSQSSLETNMYRAPIFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEV
LSPGSKNLQTYMMNRLLVHMCREFQAAEKRHLPPYIGVDEFLSQFPYQSEASFRKKIKEY
ANLQRGTNGQSILVKKRNFRIWSEDELRKMVTPELVCAYESMQASLYRLKHLGITETHPT
NISSAMSRLPDEAIALAAASHIERELQITPWNLSCNFVACTSQGKENIERMEITGVGDPS
GRGMGFSYARAPPKAPVSSAMVKKKAAANRGGSTVTGTDADLRRLSMDAAREVLLKFNVP
EEVIAKQTRWHRIAMIRKLSSEQATSGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEI
WDRQVQSLSAVNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGEEGTNDLKRDKGDGV
KGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDYEADRKKKKKAKVMVGEARLVPKMQ
SKFSFDNAEQVKQITNTLQLDGTNHLKEDAITDLREEENVPAKKSKSLKVNKAKKNDIMP
ISIPNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGKAGHMRTNKNCPKYGEDLETQLE
SADMEKSSGKSSFVDPSSLSQHKAPSKKSMSKSATKVAPVDNSTKIPLKFKCSSTEKSSD
KPAVETLQSSDKPVTSDSETAKSAKVNKIIIPKKVKPDDTLAESRKHAIVIRPPTDSGRG
QVDSHKFPIKIRPPTEIDREQSHKKIVIKRTKEVIDLELDSPGGNTGLQHRKTKRIVELS
NFEKQKKQETVYGTEGFKKWNSKEDRRWREEQEKWRNDARLREEDRARRHHKEEIRMLKE
QERLDEIKRFEEDIRREREEEERQKAKKKKKKKKPELRDEYLDDPRARRHDKRMPERDRS
GKRRSVTELGKIGADYMPPTKRRRGGGGEVGLANILESVVDTIVKDRYDLSYLFLKPVSK
KEAPDYLDVIERPMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLA
DMLLEYCDYLLNENDDSLTEAEAGIEIRDF
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgggttacgattcggatagcccctcgcaagatgggagggatgaagacgacgaagaagaa
tatgaggattctggcaagggtaatcgttttcttgggttcatgtttggaaatgtagataac
tctggtgatctcgatgttgattatcttgatgaggacgcaaaggagcatctttctgcatta
gctgataagctgggtccatcactgacagatatagatttgtcaggaaaatcaccacaaaca
ccacctgacgttgttgaacaagactgtgatgtaaaagctgaagacgctgttgattatgaa
gatattgatgaagaatatgatggtccagagacagaagctgccaatgaagaggactattta
ttgccaaaaaaagaatttttctcttctgaagcctctgtatgtttggaatccaaagcttct
gtctttgatgatgaaaattatgatgaagaatctgaaaaggagcaagactttgtgaatgac
gattctaaagtttataacatccctttagctggggagcaggaagagagttttgtggatgca
tctaaagaagagagttcgcttgaacatgaattacatgttgactcaccgcagactgaagag
ttggatgctgatgtacaaaaacttgaggaggatggccctgaagttcagaaaaggtctatg
gctatgccattgcctgttttatgtgtggaagatggtgtggcaattttacgtttctctgaa
atctttggcattcatgaacctctcagaaagggagaaaagagagagcatcgacattctatt
cctagagatagatacaagtctttcgatttaactgatgattttgtagaagaggatgaagag
gaatttctcaagggcttctcccagagtctctctctttctaaacaggtttgtgtagttcat
aatgatgtatcagaaagcaatgatgttgacttggagtttccaaaatttggatttcttcat
gcggatgcctcagtggacaggaaagatgatcaacaatcaaaggactcgtgtcatagtgct
gaaccgatgaaaggggattttgtagaagatcatttctggaaagatcatcctttcatgttg
gccaacttttatcctcttgatcagcaagactgggaagataaaatcctttggggcaattct
cctgttccaagttataataatgttgaaagctgtgaaatttctggacccgagttgggagct
tctggtggcagtgaaatagaaattgaaagtgggatccataatattcagatggagcctcag
aaggtactggaggataaaaatcataatgtcttaatgcgcagctctcctgtcaaattggag
ccctttggctcaagggattcttctggagctaagaccaatttaatatccagaagtctcttt
cacccccaacttctaaggttagaatccagatctgaagtggatagttctagtcttgcagat
ggaagagatgcagagatatctgagcataatcaaagtggtcaagtgaagcgctttaccaag
gttatatcacaaaacagagacatgatggagggctcctggttagacaagataatatgggag
gagcttgatcagcctacagtgaaaccgaagcttatctttgatcttcaggatgatcaaatg
cactttgaagttttagataccaaggatggtacacatctttgccttcatgctggggctatg
attttaactcattctttaaaattaagcagcggggattcttctgagctaccaggacatgga
agtcaatatggatggcgatatgttgctaatgacaaacactattcaaaccgtaaaacttct
cagcaactgaaatcaaattccaaaaaacgctcagctcatggtgtcaaagtttttcactca
caacctgcactgaagctgcagacaatgaaattgaaattgagcaataaagatattgcaaat
tttcaccggccaaaagcactatggtatccccatgacaatgaggtggctgtcaaagaacaa
gggaaattgccaacacaaggacccatgaaaattattataaagagtttgggtggcaagggg
agtaaactgcatgtcgatgttgaagaaactctctcttctgttaaagcaaaagcttccaaa
aagctagattttaaggtatcagaaacagtgaaaacattttatttggggagggagcttgaa
gatcacaagtcacttgctgcacaaaatgttcaaccaaactccttgttacatcttgttcgt
acaaagatacatttgtggccaaaagcacaaagggttcctggtgagaacaagtccttgcgt
cctcctggggcattcaagaaaaagtctgatctgtctgtaaaagatggacatgtttttctg
atggagtattgtgaagaaaggcctttacttttgagcaatgttggaatgggtgcaagactt
tgtacatactatcaaaaatgctcaccagatgaccaatctggctccttattacgcaacaca
gatagtagattggggcacattatttccctggatcctgctgataaatttcctttccttgga
gatttaaagcctggttgcagtcagtcatcactagagacaaatatgtatagagcacccata
tttccccataaagttccattaactgactacctgctggttcgttcatcaaagggaaagcta
tcattaaggcgcattgataaaattaatgttgtcggacagcaggagcctctcatggaggta
ttatcacctggaagtaaaaatcttcagacttacatgatgaacaggctattggtacacatg
tgccgtgaattccaagcagcagagaagcgacatttgcctccgtatattggtgttgatgaa
tttctctcacagtttccttaccaatcagaagcatcattccgtaagaaaatcaaggaatat
gccaatttacagaggggaacaaatggacagtcaattttggttaaaaagcgaaattttcgc
atttggtcagaggatgaattgagaaaaatggttacaccagagcttgtttgtgcttacgaa
agcatgcaagctagcctctaccgtctaaaacatttaggaattactgaaacacacccgact
aatatttcatctgcaatgagtcgtcttcctgatgaagcaatagcattggctgctgcatca
cacatcgagagggaactgcagattactccttggaacttgagttgcaattttgttgcctgt
acaagccagggtaaggaaaatattgaacgaatggaaattactggtgttggtgatccttct
ggtcgtggcatgggttttagctatgctcgggcacctccaaaggcaccagtgtctagtgca
atggtgaaaaagaaagcagctgctaaccgtggaggttctactgttaccggtacagatgct
gatctacgtagattaagcatggatgctgcacgagaggttcttcttaagttcaatgttcct
gaggaagtcattgcaaaacaaactaggtggcatcgcattgctatgatacggaaactttca
agtgaacaagctacatctggggttaaggttgatccaacaactatcagcaaatatgctcgt
ggccagcgaatgtcctttcttcagttacagcagcagaccagagagaaatgccaggagatt
tgggatcgacaagttcaaagtctgtcagctgtaaatggtgatgaaaatgaaagtgattca
gaagggaatagtgatttggattcttttgctggagatctggaaaatttacttgatgctgag
gagtgtgaagaaggagaagagggtaccaatgacttaaaacgtgataagggagatggcgtt
aagggtcttaaaatgagaagacgcccaactttagctcaggcagaggaggaaatagaagat
gaagcagctgaggctgctgaattatgcaggctgcttatggatgattatgaagctgacaga
aagaaaaagaagaaagctaaagttatggtgggagaagcaagattggtaccgaagatgcaa
tcaaaattttcctttgacaatgctgaacaagttaagcaaataactaatactttacaatta
gatggaactaatcacttgaaagaggatgcaatcacagatcttagggaggaggaaaacgtt
cctgctaaaaaaagcaaatcactgaaggtcaataaagccaagaagaatgatattatgcct
attagtatacccaataaaaaaatcaaattgaatatgggagaaggaattaagaaccaggta
tttaaggagaaaaaaccatcaagggaaacttttgtttgtggagcatgtggtaaggctggg
cacatgcgaacgaataagaactgtccaaaatatggtgaagatctagaaactcaacttgaa
tctgcagacatggaaaaatcatctggaaaatctagctttgtggatccctctagtctctcc
cagcataaagctccctccaaaaagtcaatgtctaaaagcgcaacaaaagttgctcctgtt
gacaattcaacaaaaattccattgaaattcaaatgcagctccacagagaaatcttctgat
aaacctgcagtagaaaccctgcagagttctgacaagccagtcacttctgactcagaaact
gcaaagtctgctaaggttaataagataattattcccaagaaagtgaaaccagatgatacg
ctggctgaatctcgtaagcatgctattgttatacggcctcctactgattcaggtagagga
caggttgattctcataagttcccaattaaaatacgcccgcctacagaaatagatagggag
caaagccacaaaaagattgttataaagcgtacaaaggaagttattgatctggaactggac
agtcctggtggaaacactggacttcaacacagaaaaactaaaagaattgttgaattgtca
aattttgagaaacaaaagaaacaggagactgtgtatggaactgaaggttttaaaaaatgg
aacagtaaagaggacagaagatggcgggaagagcaagagaaatggagaaatgatgcaagg
cttcgagaagaagacagagcaagaaggcatcacaaagaagaaatcaggatgctcaaagag
caagaaaggttagacgagataaaaagatttgaagaagatattagaagagaaagggaggag
gaagagcgacaaaaagctaagaagaaaaagaagaagaagaaacctgagttaagagatgag
tatttagatgaccccagagcaagaagacatgataagagaatgccagaaagagaccgaagt
ggaaaaaggagatctgttactgagttaggaaagattggtgcagattatatgccgccaaca
aaacgccgaagagggggagggggagaggttggtttggcaaatatcttggagagcgttgtg
gacaccattgtgaaagataggtatgatctatcgtatcttttcttgaaaccggtgtcgaag
aaggaggctcccgactacctggacgttatagagaggcctatggatctttccagaatcagg
gagagagtacggaatatggagtacaagagccgagaagatttcaggcacgacatgtggcag
attacttttaatgcacataaatataacgacgggcgaaatccaggaattcccccgcttgca
gatatgcttttggaatattgtgattatttgttgaatgagaatgatgatagcctcactgaa
gcagaagctggcattgaaattagagatttctaa
DBGET
integrated database retrieval system
