KEGG   Glycine soja (wild soybean): 114425356
Entry
114425356         CDS       T06057                                 
Name
(RefSeq) protein SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114425356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114425356
   04131 Membrane trafficking [BR:gsj04131]
    114425356
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114425356
Membrane trafficking [BR:gsj04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    114425356
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 ANAPC4_WD40 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 114425356
NCBI-ProteinID: XP_028248055
LinkDB
Position
1:55838284..55841536
AA seq 326 aa
MAKELLTLDNGTTCTSWNYSGTRLAAGSVDGTLSIFDSRDPPSSSSLHSTFKSRVLEGNI
VKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMFKSFGNSSSKVLDAQFGISL
TSLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQNVIESVSSFGKASCLSASISWNPQK
GGSQESSFLVGFNSNTSELNSSKVCEFDQAHQRWLPVAELALPEEKGDQLYAVAWAPNIG
RPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHEGMVWQMEWDMSGMTLATTG
HDGMVRLWQSNLNGVWHQQAAFEPTS
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcgaaggagttgttgactcttgataatggcacaacctgcacatcatggaactattct
ggcaccaggctcgctgcgggttccgttgatggcacgctttcaatcttcgattcccgcgac
ccaccttcatcttcttccctccattctactttcaaatctagggttctagaaggaaacatc
gtgaagattgtttggattccgccagagtatggtgatgcagttgcgtgcatttctgccgat
ggaattgtttcattgtgggaggaggtcgcagaagattcccagtctcttcagtggaagatg
ttcaaaagctttggaaacagttcaagcaaagtccttgatgctcaatttggaatctctctg
actagtttgaaaatggttgctgcatattcagatgggaatgtaagagtttttgagctctcg
gatcccttggaactgagaaactggcagcttcaggctgaatttcaaaatgttatcgagtca
gtgtcttcgtttggaaaggcctcatgcctctcagcatccatatcttggaatccacaaaaa
ggtggaagccaggagtccagcttccttgtaggcttcaattcaaatacatcagagcttaat
tcttctaaggtttgcgaatttgatcaggctcatcaaagatggcttcctgtggcagaactg
gcactccctgaggagaagggtgatcagctttatgctgttgcatgggcaccaaatattggc
agaccatatgagatcattgcggttgcaacccacaagggacttgcaatatggcatcttgga
ttgaaccctgatcatgatggaagactcccagtagagagagttgcactactgtcaggtcac
gagggcatggtgtggcaaatggagtgggatatgagtggaatgactttggctactacaggt
catgatggaatggtccgattatggcagtcgaatctcaatggcgtttggcatcagcaagct
gcatttgaacccacttcttag

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