Glycine soja (wild soybean): 114425356
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Entry
114425356 CDS
T06057
Name
(RefSeq) protein SEH1-like
KO
K14299
nucleoporin SEH1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114425356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114425356
04131 Membrane trafficking [BR:
gsj04131
]
114425356
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114425356
Membrane trafficking [BR:
gsj04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
114425356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
114425356
NCBI-ProteinID:
XP_028248055
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All DBs
Position
1:55838284..55841536
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AA seq
326 aa
AA seq
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MAKELLTLDNGTTCTSWNYSGTRLAAGSVDGTLSIFDSRDPPSSSSLHSTFKSRVLEGNI
VKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMFKSFGNSSSKVLDAQFGISL
TSLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQNVIESVSSFGKASCLSASISWNPQK
GGSQESSFLVGFNSNTSELNSSKVCEFDQAHQRWLPVAELALPEEKGDQLYAVAWAPNIG
RPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHEGMVWQMEWDMSGMTLATTG
HDGMVRLWQSNLNGVWHQQAAFEPTS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggagttgttgactcttgataatggcacaacctgcacatcatggaactattct
ggcaccaggctcgctgcgggttccgttgatggcacgctttcaatcttcgattcccgcgac
ccaccttcatcttcttccctccattctactttcaaatctagggttctagaaggaaacatc
gtgaagattgtttggattccgccagagtatggtgatgcagttgcgtgcatttctgccgat
ggaattgtttcattgtgggaggaggtcgcagaagattcccagtctcttcagtggaagatg
ttcaaaagctttggaaacagttcaagcaaagtccttgatgctcaatttggaatctctctg
actagtttgaaaatggttgctgcatattcagatgggaatgtaagagtttttgagctctcg
gatcccttggaactgagaaactggcagcttcaggctgaatttcaaaatgttatcgagtca
gtgtcttcgtttggaaaggcctcatgcctctcagcatccatatcttggaatccacaaaaa
ggtggaagccaggagtccagcttccttgtaggcttcaattcaaatacatcagagcttaat
tcttctaaggtttgcgaatttgatcaggctcatcaaagatggcttcctgtggcagaactg
gcactccctgaggagaagggtgatcagctttatgctgttgcatgggcaccaaatattggc
agaccatatgagatcattgcggttgcaacccacaagggacttgcaatatggcatcttgga
ttgaaccctgatcatgatggaagactcccagtagagagagttgcactactgtcaggtcac
gagggcatggtgtggcaaatggagtgggatatgagtggaatgactttggctactacaggt
catgatggaatggtccgattatggcagtcgaatctcaatggcgtttggcatcagcaagct
gcatttgaacccacttcttag
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