Geobacter sulfurreducens KN400: KN400_0518
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Entry
KN400_0518 CDS
T01940
Symbol
nfo
Name
(GenBank) endodeoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KN400_0518 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsk03400
]
KN400_0518 (nfo)
Enzymes [BR:
gsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
KN400_0518 (nfo)
DNA repair and recombination proteins [BR:
gsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KN400_0518 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADI83381
LinkDB
All DBs
Position
complement(550929..551819)
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AA seq
296 aa
AA seq
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MKDYLGAHMSIAGGIHKAPARGNRVGCGVIQVFTQNSNQWRGKMPTEGEAALFREQWEAA
GLHEIIAHDIYLINLAAPPGETRDKSLAAFREEMERCTRLGIGTIVMHPGAHLGDGEETG
IRRICEAFNRLIPAVPEFTGVILLETTAGQGTSLGHTFEQLAAIIAGTAFPDRFAVCFDT
CHTFAAGYDFTTGEGYRRVFAEFDRLIGLDRLRCFHLNDSRKGLNSRVDRHEHIGRGTLG
LEPFRFLMNDDRFTTVPKILETPKGDDDEFDIMNLNTLRRLVRRRTTKERTEPCPS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactatctcggcgcgcacatgtccatcgccggcgggattcacaaggctccggcg
cggggaaaccgggtcgggtgcggcgtgatccaggtcttcacccagaactccaaccagtgg
cgggggaagatgcccaccgagggggaggcggctctgttccgtgaacagtgggaagccgcg
ggcctccacgaaatcatcgcccatgacatctacctcatcaacctggcggccccgccgggc
gagacacgggacaagagcctcgcggccttccgggaggagatggagcgctgtacccgcctc
ggtatcggcactatcgtgatgcatcccggtgcccacctgggcgacggagaagagaccggc
atccggcggatctgtgaggccttcaaccgcctgatccccgcggttcccgagttcaccggc
gtgatcctgctggagaccaccgcaggccaaggcaccagcctgggtcataccttcgagcag
ttggccgccattatcgccgggaccgcgtttcccgaccgcttcgcggtctgcttcgacacc
tgccacacctttgccgccggatacgacttcaccaccggagaggggtaccggcgcgtcttc
gccgagttcgaccggctgatcggcctggaccggctccggtgcttccacctgaacgattcc
cggaaggggctcaactcccgggtggaccggcacgagcatatcggccggggaacgctgggg
ctggagccgttccggttcctcatgaacgatgaccgcttcacgacggtgcccaagattctc
gaaacgccaaagggagatgacgacgagtttgacatcatgaacctgaacacgctccggaga
ctcgtccgccggcgcacaacaaaggaaagaaccgagccatgcccgagttga
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