Geobacter sulfurreducens KN400: KN400_1027
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Entry
KN400_1027 CDS
T01940
Name
(GenBank) ribonuclease Z-related hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gsk
Geobacter sulfurreducens KN400
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsk03016
]
KN400_1027
Enzymes [BR:
gsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KN400_1027
Transfer RNA biogenesis [BR:
gsk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KN400_1027
Prokaryotic type
KN400_1027
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
ADI83888
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All DBs
Position
complement(1107143..1108150)
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AA seq
335 aa
AA seq
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MPPLFHPHLVNGPFDDPGLYVDFLFERRAVLFDLGDTAPLPPRKVLRLSHIFVSHTHVDH
FIGFDRVVRLCLGREKRLHLLGPPGFVDQVAARLAGYTWNLVETFPTDFTLAAAELHPDG
SVHSAEFHCLAAFSRDNERRDRAAGGVLLDEEAFRVRSVFLDHGIPCLAFALEEKNHVHI
LKNRLREAGLPTGAWLAELKRAILGGRDDGEPFRAWWRDGGKECEAWFPLGELRERFTKT
VAGQKIVYVTDAAPTPENRRLIVELAAGADYLFIEAPFLDEERERAGDRCHLTARIAGEL
GRDAGVARVVPFHFSPRYMGRESLLRDEVERAFRG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccgccactctttcaccctcatctcgtgaacggccctttcgatgatccgggactctac
gtcgattttctgttcgagcggcgggcggtcctgtttgacctgggcgacacggctccgctg
ccgcccaggaaggtgctccgtctctcccacatcttcgtctcccacacccatgtggaccac
ttcataggcttcgaccgggtggtaaggctctgcctcggccgggaaaaacggcttcacctg
ctcgggccgcccggattcgtcgaccaagtggccgcccgactggcgggatacacctggaac
ctggtggaaaccttccccaccgacttcaccctcgctgccgccgagcttcatccggacgga
agcgttcacagcgcggagtttcattgccttgccgcgttttcgagggacaacgagcggcgg
gatcgcgccgccggcggagtgcttctggatgaagaggcattccgcgtcagaagcgtcttc
ctcgatcacggcatcccctgcctcgcctttgccctggaagaaaaaaaccacgtgcacatt
ctcaagaaccgcctgcgggaggcgggattaccgactggggcgtggctggcggaactcaaa
cgggcaatcctgggcggcagggacgacggggagcccttcagggcatggtggcgggacggt
ggaaaagaatgcgaggcgtggttccctctcggcgaactgcgggagcgttttaccaaaacc
gtggccggacagaaaattgtctacgtcacggacgcagcaccgaccccggaaaaccggcgt
ctcatcgtggagctggcggccggtgccgattacctcttcatagaggcccccttcctggat
gaagagcgggagcgcgccggcgaccgatgtcatctgaccgcccgcattgcaggcgaactg
ggcagggatgcgggcgttgcgcgggtggtcccgttccacttttccccccgttacatggga
agggaatcgctactgcgggatgaagtggagcgggccttcagggggtga
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