Geobacter sulfurreducens KN400: KN400_1098
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Entry
KN400_1098 CDS
T01940
Symbol
yhaM
Name
(GenBank) 3'-to-5' exonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gsk
Geobacter sulfurreducens KN400
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsk03019
]
KN400_1098 (yhaM)
Messenger RNA biogenesis [BR:
gsk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KN400_1098 (yhaM)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
ADI83959
LinkDB
All DBs
Position
1177389..1178516
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AA seq
375 aa
AA seq
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MSKIFIASIHDRDLVDSVFLVKEKIMAMAKNGKPYMTLRLMDKSGEIEGRVWDNVDQLSA
SFDKDDFVGVRSKASVYLGKMQLIISELVRVPEDRVNLADFLPESDRSIAEMESELKALV
ETFSDQHLKALMKAFFDDSSFMELYRTAPAAKGMHHVYLGGLLEHSLAVSRLVDAIVPLY
ADLNRDLLVAGALLHDVGKVREMTYLRSFDYTDEGKLIGHITIGVEMLQERISTIPGFPP
ELGMLLKHMLLSHHGQYEYGSPKRPKTVEATILNYLDDLDSKINGIRTHIRKESENLGRW
TSYHRLYDRYFYKESYSGEEEYREGADELMVLEPEPVSLPAAPRAAEAERKSGNTARKGF
SNNPFETLQKNLDLF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaagattttcatagcgagcatccatgaccgcgatctggtcgattccgtgtttctc
gtgaaggaaaagatcatggccatggccaagaacggcaagccctacatgacgcttcggctc
atggacaaaagcggcgagatagaggggcgtgtctgggacaacgttgaccagctgtcggcc
tccttcgataaggacgacttcgttggcgtccgctccaaggcatcggtctacctgggcaaa
atgcagcttatcatttccgagctggtgcgggttcccgaagacagggtcaacctggcggac
tttctccccgaatcggaccgctccattgccgagatggagagcgagctcaaggccctggtg
gaaaccttttccgatcagcacctgaaagcgctgatgaaggcctttttcgacgattcttcc
ttcatggagctctaccggaccgcgccggccgccaaggggatgcaccacgtctatctgggt
ggactgctggagcactcactggccgtgtcccgcctggttgacgccatcgtccccctctac
gcggatctcaaccgcgatctgctggtggcgggtgccctgttgcacgacgtgggcaaggtg
cgggagatgacgtacctgcgttccttcgactacaccgacgaggggaaactcatcggccat
atcaccatcggcgtggagatgctccaggagcggatttcgaccattcccggcttcccgccg
gagctggggatgctgctcaagcacatgctgctgtcccaccatggtcagtacgaatacggt
tcccccaagcgccccaagactgtcgaggcaacgattctcaactacctggacgatctggac
tccaagatcaacgggatcaggacccatatccgcaaggaaagcgaaaacctggggcgctgg
acctcctatcaccggctctatgaccgctacttctacaaggagagctacagcggcgaggag
gaataccgggaaggggcggatgagctcatggtgctcgagccggagccggtatcgctgccg
gctgcccctcgggccgcggaggccgagcgcaaaagcggcaacaccgcccgaaaggggttc
agcaacaatccgttcgagaccctgcaaaagaatctggatctgttctga
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